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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183500871
OMGR01000841
295385
Bacteroidota
CCA
Trp
>WENV183500749
OMGR01000218
404226
Bacteroidota
CCT
Arg
>WENV183500849
OMGR01000627
404226
Bacteroidota
CCT
Arg
>WENV183500836
OMGR01000553
175904
Bacteroidota
CGG
Pro
>WENV183501134
OMGR01013545
289031
Bacteroidota
CAT
Met
>WENV183501106
OMGR01010083
280557
Bacteroidota
CAT
Met
>WENV183500750
OMGR01000218
398871
Bacteroidota
TTC
Glu
>WENV183500751
OMGR01000218
398871
Bacteroidota
TTC
Glu
>WENV183500651
OMGR01000036
175906
Bacteroidota
GTG
His
>WENV183500652
OMGR01000036
175906
Bacteroidota
GTG
His
>WENV183500994
OMGR01002845
351598
Bacteroidota
CGG
Pro
>WENV183500788
OMGR01000341
118089
Bacteroidota
TAG
Leu
>WENV183500754
OMGR01000220
398872
Bacteroidota
GGT
Thr
>WENV183500669
OMGR01000052
280530
Bacteroidota
CCA
Trp
>WENV183500743
OMGR01000200
280530
Bacteroidota
CCA
Trp
>WENV183500710
OMGR01000113
203954
Bacteroidota
GTC
Asp
>WENV183500727
OMGR01000170
178907
Bacteroidota
TCT
Arg
>WENV183500935
OMGR01001542
29791
Bacteroidota
GCT
Ser
>WENV183500974
OMGR01002232
182267
Bacteroidota
GTT
Asn
>WENV183501073
OMGR01006525
182267
Bacteroidota
GTT
Asn
>WENV183500641
OMGR01000027
20449
Bacteroidota
GGA
Ser
>WENV183500783
OMGR01000294
20449
Bacteroidota
GGA
Ser
>WENV183500789
OMGR01000342
20449
Bacteroidota
GGA
Ser
>WENV183500645
OMGR01000034
57807
Bacteroidota
TGA
Ser
>WENV183500798
OMGR01000389
57807
Bacteroidota
TGA
Ser
>WENV183500950
OMGR01001844
57807
Bacteroidota
TGA
Ser
>WENV183500980
OMGR01002264
175886
Bacteroidota
GGC
Ala
>WENV183501144
OMGR01014445
418894
Bacteroidota
TTC
Glu
>WENV183500807
OMGR01000429
399200
Bacteroidota
CAT
Met
>WENV183501222
OMGR01031949
186874
Bacteroidota
CAT
Met
>WENV183500719
OMGR01000138
332896
Bacteroidota
TTT
Lys
>WENV183500757
OMGR01000226
332896
Bacteroidota
TTT
Lys
>WENV183500897
OMGR01001114
332896
Bacteroidota
TTT
Lys
>WENV183500745
OMGR01000205
175844
Bacteroidota
GGC
Ala
>WENV183500755
OMGR01000221
73011
Bacteroidota
CAA
Leu
>WENV183500780
OMGR01000286
73011
Bacteroidota
CAA
Leu
>WENV183501065
OMGR01006085
280515
Bacteroidota
CCA
Trp
>WENV183500643
OMGR01000030
158068
Bacteroidota
GGG
Pro
>WENV183500954
OMGR01001926
158068
Bacteroidota
GGG
Pro
>WENV183500715
OMGR01000119
331443
Bacteroidota
CGT
Thr
>WENV183500667
OMGR01000052
74084
Bacteroidota
CAG
Leu
>WENV183500672
OMGR01000054
176192
Bacteroidota
TCT
Arg
>WENV183501133
OMGR01013366
400088
Bacteroidota
GGT
Thr
>WENV183500640
OMGR01000024
280446
Bacteroidota
TTT
Lys
>WENV183501005
OMGR01003368
280446
Bacteroidota
TTT
Lys
>WENV183500711
OMGR01000114
484496
Bacteroidota
TTG
Gln
>WENV183500747
OMGR01000211
484496
Bacteroidota
TTG
Gln
>WENV183500613
OMGR01000003
416636
Bacteroidota
TTC
Glu
>WENV183500614
OMGR01000003
416636
Bacteroidota
TTC
Glu
>WENV183500684
OMGR01000076
398836
Bacteroidota
GCA
Cys
>WENV183500730
OMGR01000177
398836
Bacteroidota
GCA
Cys
>WENV183500873
OMGR01000859
398836
Bacteroidota
GCA
Cys
>WENV183500878
OMGR01000909
398836
Bacteroidota
GCA
Cys
>WENV183500879
OMGR01000909
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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