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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183502322
OMGT01000119
117741
Bacteroidota
TAG
Leu
>WENV183502497
OMGT01001133
398829
Bacteroidota
CCT
Arg
>WENV183502540
OMGT01001741
175904
Bacteroidota
CGG
Pro
>WENV183502209
OMGT01000014
289031
Bacteroidota
CAT
Met
>WENV183502303
OMGT01000103
280553
Bacteroidota
TTT
Lys
>WENV183502249
OMGT01000046
280557
Bacteroidota
CAT
Met
>WENV183502545
OMGT01001794
280557
Bacteroidota
CAT
Met
>WENV183502372
OMGT01000233
20206
Bacteroidota
GGA
Ser
>WENV183502176
OMGT01000002
483416
Bacteroidota
CTG
Gln
>WENV183502233
OMGT01000033
56493
Bacteroidota
TGA
Ser
>WENV183502234
OMGT01000033
175903
Bacteroidota
GTG
His
>WENV183502563
OMGT01002156
118089
Bacteroidota
TAG
Leu
>WENV183502541
OMGT01001742
398872
Bacteroidota
GGT
Thr
>WENV183502425
OMGT01000441
175908
Bacteroidota
GTC
Asp
>WENV183502689
OMGT01011258
175936
Bacteroidota
CAT
Met
>WENV183502417
OMGT01000413
405877
Bacteroidota
GGT
Thr
>WENV183502505
OMGT01001239
29791
Bacteroidota
GCT
Ser
>WENV183502463
OMGT01000689
182267
Bacteroidota
GTT
Asn
>WENV183502422
OMGT01000433
21127
Bacteroidota
GGA
Ser
>WENV183502431
OMGT01000527
57807
Bacteroidota
TGA
Ser
>WENV183502477
OMGT01000789
175886
Bacteroidota
GGC
Ala
>WENV183502751
OMGT01031057
179697
Bacteroidota
TGT
Thr
>WENV183502506
OMGT01001239
398860
Bacteroidota
CTC
Glu
>WENV183502535
OMGT01001639
480404
Bacteroidota
TTG
Gln
>WENV183502392
OMGT01000311
280451
Bacteroidota
CGT
Thr
>WENV183502362
OMGT01000208
418894
Bacteroidota
TTC
Glu
>WENV183502294
OMGT01000092
99847
Bacteroidota
GTA
Tyr
>WENV183502444
OMGT01000579
399200
Bacteroidota
CAT
Met
>WENV183502551
OMGT01001955
399200
Bacteroidota
CAT
Met
>WENV183502594
OMGT01003379
186874
Bacteroidota
CAT
Met
>WENV183502565
OMGT01002169
488746
Bacteroidota
CTG
Gln
>WENV183502614
OMGT01004114
399026
Bacteroidota
CCT
Arg
>WENV183502519
OMGT01001410
280478
Bacteroidota
GCC
Gly
>WENV183502364
OMGT01000209
175844
Bacteroidota
GGC
Ala
>WENV183502567
OMGT01002254
175844
Bacteroidota
GGC
Ala
>WENV183502531
OMGT01001615
280532
Bacteroidota
>WENV183502622
OMGT01004876
280515
Bacteroidota
CCA
Trp
>WENV183502643
OMGT01005922
480318
Bacteroidota
CTG
Gln
>WENV183502241
OMGT01000041
158068
Bacteroidota
GGG
Pro
>WENV183502329
OMGT01000132
158068
Bacteroidota
GGG
Pro
>WENV183502588
OMGT01002746
158068
Bacteroidota
GGG
Pro
>WENV183502203
OMGT01000011
398828
Bacteroidota
CCG
Arg
>WENV183502211
OMGT01000015
280446
Bacteroidota
TTT
Lys
>WENV183502308
OMGT01000108
484496
Bacteroidota
TTG
Gln
>WENV183502518
OMGT01001397
484496
Bacteroidota
TTG
Gln
>WENV183502617
OMGT01004346
285750
Bacteroidota
CCC
Gly
>WENV183502512
OMGT01001278
398836
Bacteroidota
GCA
Cys
>WENV183502305
OMGT01000107
398836
Bacteroidota
GCA
Cys
>WENV183502470
OMGT01000746
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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