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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183504066
OMGV01000177
117741
Bacteroidota
TAG
Leu
>WENV183504007
OMGV01000061
398829
Bacteroidota
CCT
Arg
>WENV183504402
OMGV01004298
404226
Bacteroidota
CCT
Arg
>WENV183504166
OMGV01000465
175904
Bacteroidota
CGG
Pro
>WENV183504128
OMGV01000326
289031
Bacteroidota
CAT
Met
>WENV183504167
OMGV01000493
156422
Bacteroidota
TAC
Val
>WENV183504472
OMGV01011193
280553
Bacteroidota
TTT
Lys
>WENV183504013
OMGV01000072
280557
Bacteroidota
CAT
Met
>WENV183504150
OMGV01000401
280557
Bacteroidota
CAT
Met
>WENV183504173
OMGV01000520
20206
Bacteroidota
GGA
Ser
>WENV183503925
OMGV01000001
483416
Bacteroidota
CTG
Gln
>WENV183504489
OMGV01014437
398871
Bacteroidota
TTC
Glu
>WENV183504024
OMGV01000093
118221
Bacteroidota
CAA
Leu
>WENV183504131
OMGV01000331
118221
Bacteroidota
CAA
Leu
>WENV183504276
OMGV01001178
56493
Bacteroidota
TGA
Ser
>WENV183504323
OMGV01001682
175906
Bacteroidota
GTG
His
>WENV183504046
OMGV01000122
175903
Bacteroidota
GTG
His
>WENV183504211
OMGV01000674
118089
Bacteroidota
TAG
Leu
>WENV183504246
OMGV01000852
175908
Bacteroidota
GTC
Asp
>WENV183504459
OMGV01009338
280530
Bacteroidota
CCA
Trp
>WENV183504479
OMGV01012667
178907
Bacteroidota
TCT
Arg
>WENV183503965
OMGV01000015
56385
Bacteroidota
TGA
Ser
>WENV183504115
OMGV01000295
56385
Bacteroidota
TGA
Ser
>WENV183504494
OMGV01015509
29791
Bacteroidota
GCT
Ser
>WENV183504264
OMGV01001054
182267
Bacteroidota
GTT
Asn
>WENV183504330
OMGV01001835
20449
Bacteroidota
GGA
Ser
>WENV183504260
OMGV01000980
56072
Bacteroidota
TAA
Leu
>WENV183504352
OMGV01002265
57807
Bacteroidota
TGA
Ser
>WENV183503980
OMGV01000028
175944
Bacteroidota
CAT
Met
>WENV183504519
OMGV01021831
175886
Bacteroidota
GGC
Ala
>WENV183504495
OMGV01015509
398860
Bacteroidota
CTC
Glu
>WENV183504139
OMGV01000355
280451
Bacteroidota
CGT
Thr
>WENV183504328
OMGV01001806
418894
Bacteroidota
TTC
Glu
>WENV183504416
OMGV01005278
399200
Bacteroidota
CAT
Met
>WENV183504031
OMGV01000095
404109
Bacteroidota
CTC
Glu
>WENV183504036
OMGV01000107
186874
Bacteroidota
CAT
Met
>WENV183504095
OMGV01000267
46648
Bacteroidota
TAA
Leu
>WENV183504258
OMGV01000976
46648
Bacteroidota
TAA
Leu
>WENV183503990
OMGV01000039
332896
Bacteroidota
TTT
Lys
>WENV183504255
OMGV01000966
488746
Bacteroidota
CTG
Gln
>WENV183504250
OMGV01000899
280478
Bacteroidota
GCC
Gly
>WENV183504154
OMGV01000415
20766
Bacteroidota
GGA
Ser
>WENV183504377
OMGV01002917
73011
Bacteroidota
CAA
Leu
>WENV183503989
OMGV01000039
158068
Bacteroidota
GGG
Pro
>WENV183504096
OMGV01000272
158068
Bacteroidota
GGG
Pro
>WENV183504087
OMGV01000233
398828
Bacteroidota
CCG
Arg
>WENV183504222
OMGV01000717
398828
Bacteroidota
CCG
Arg
>WENV183504384
OMGV01003404
74084
Bacteroidota
CAG
Leu
>WENV183504521
OMGV01022172
480325
Bacteroidota
CTG
Gln
>WENV183504158
OMGV01000446
140771
Bacteroidota
>WENV183504408
OMGV01004727
176192
Bacteroidota
TCT
Arg
>WENV183504160
OMGV01000448
176192
Bacteroidota
TCT
Arg
>WENV183503963
OMGV01000013
481328
Bacteroidota
TTG
Gln
>WENV183504093
OMGV01000256
481328
Bacteroidota
TTG
Gln
>WENV183504427
OMGV01005483
400088
Bacteroidota
GGT
Thr
>WENV183504032
OMGV01000096
484496
Bacteroidota
TTG
Gln
>WENV183504254
OMGV01000935
484496
Bacteroidota
TTG
Gln
>WENV183504261
OMGV01001004
285750
Bacteroidota
CCC
Gly
>WENV183504068
OMGV01000180
398836
Bacteroidota
GCA
Cys
>WENV183504225
OMGV01000748
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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