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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183504713
OMGW01001380
295385
Bacteroidota
CCA
Trp
>WENV183504642
OMGW01000415
285360
Bacteroidota
TTT
Lys
>WENV183504753
OMGW01002478
285360
Bacteroidota
TTT
Lys
>WENV183504818
OMGW01006850
285360
Bacteroidota
TTT
Lys
>WENV183504641
OMGW01000408
117741
Bacteroidota
TAG
Leu
>WENV183504849
OMGW01009561
280557
Bacteroidota
CAT
Met
>WENV183504805
OMGW01005527
20492
Bacteroidota
GGA
Ser
>WENV183504710
OMGW01001287
20206
Bacteroidota
GGA
Ser
>WENV183504790
OMGW01004347
56493
Bacteroidota
TGA
Ser
>WENV183504715
OMGW01001424
175903
Bacteroidota
GTG
His
>WENV183504673
OMGW01000702
57807
Bacteroidota
TGA
Ser
>WENV183504926
OMGW01025210
175902
Bacteroidota
GGC
Ala
>WENV183504860
OMGW01011117
398860
Bacteroidota
CTC
Glu
>WENV183504789
OMGW01004339
480404
Bacteroidota
TTG
Gln
>WENV183504839
OMGW01008505
280451
Bacteroidota
CGT
Thr
>WENV183504683
OMGW01000780
99847
Bacteroidota
GTA
Tyr
>WENV183504747
OMGW01002344
99847
Bacteroidota
GTA
Tyr
>WENV183504666
OMGW01000620
488746
Bacteroidota
CTG
Gln
>WENV183504910
OMGW01022469
175844
Bacteroidota
GGC
Ala
>WENV183504781
OMGW01004096
480318
Bacteroidota
CTG
Gln
>WENV183504679
OMGW01000722
158068
Bacteroidota
GGG
Pro
>WENV183504827
OMGW01007378
398828
Bacteroidota
CCG
Arg
>WENV183504765
OMGW01003052
159415
Bacteroidota
TAC
Val
>WENV183504691
OMGW01000956
280446
Bacteroidota
TTT
Lys
>WENV183504888
OMGW01015608
280446
Bacteroidota
TTT
Lys
>WENV183504767
OMGW01003074
484496
Bacteroidota
TTG
Gln
>WENV183504806
OMGW01005633
484496
Bacteroidota
TTG
Gln
>WENV183504887
OMGW01015404
117804
Bacteroidota
TAG
Leu
>WENV183504684
OMGW01000782
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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