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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183505361
OMGX01001898
295385
Bacteroidota
CCA
Trp
>WENV183505134
OMGX01000251
117741
Bacteroidota
TAG
Leu
>WENV183505663
OMGX01013818
398829
Bacteroidota
CCT
Arg
>WENV183505237
OMGX01000730
175838
Bacteroidota
GTT
Asn
>WENV183505318
OMGX01001353
289031
Bacteroidota
CAT
Met
>WENV183505168
OMGX01000355
280557
Bacteroidota
CAT
Met
>WENV183505007
OMGX01000009
20206
Bacteroidota
GGA
Ser
>WENV183505056
OMGX01000084
483416
Bacteroidota
CTG
Gln
>WENV183505001
OMGX01000003
175903
Bacteroidota
GTG
His
>WENV183505818
OMGX01044326
291612
Bacteroidota
>WENV183505716
OMGX01021219
118089
Bacteroidota
TAG
Leu
>WENV183505118
OMGX01000192
405877
Bacteroidota
GGT
Thr
>WENV183505204
OMGX01000495
29791
Bacteroidota
GCT
Ser
>WENV183505182
OMGX01000396
21127
Bacteroidota
GGA
Ser
>WENV183505027
OMGX01000037
56072
Bacteroidota
TAA
Leu
>WENV183505396
OMGX01002262
57807
Bacteroidota
TGA
Ser
>WENV183505225
OMGX01000653
57807
Bacteroidota
TGA
Ser
>WENV183505464
OMGX01003410
175886
Bacteroidota
GGC
Ala
>WENV183505017
OMGX01000017
175902
Bacteroidota
GGC
Ala
>WENV183505113
OMGX01000179
280451
Bacteroidota
CGT
Thr
>WENV183505763
OMGX01030212
418894
Bacteroidota
TTC
Glu
>WENV183505359
OMGX01001898
99847
Bacteroidota
GTA
Tyr
>WENV183505896
OMGX01072635
399200
Bacteroidota
CAT
Met
>WENV183505209
OMGX01000512
186874
Bacteroidota
CAT
Met
>WENV183505574
OMGX01007462
215303
Bacteroidota
GTC
Asp
>WENV183505570
OMGX01007002
332896
Bacteroidota
TTT
Lys
>WENV183505006
OMGX01000009
488746
Bacteroidota
CTG
Gln
>WENV183505319
OMGX01001359
280478
Bacteroidota
GCC
Gly
>WENV183505599
OMGX01009038
280515
Bacteroidota
CCA
Trp
>WENV183505450
OMGX01003042
183889
Bacteroidota
GGC
Ala
>WENV183505539
OMGX01005798
158068
Bacteroidota
GGG
Pro
>WENV183505243
OMGX01000757
398828
Bacteroidota
CCG
Arg
>WENV183505330
OMGX01001431
484496
Bacteroidota
TTG
Gln
>WENV183505018
OMGX01000018
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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