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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183506451
OMGY01000893
172207
Bacteroidota
GGG
Pro
>WENV183507438
OMGY01021988
295385
Bacteroidota
CCA
Trp
>WENV183506087
OMGY01000114
117741
Bacteroidota
TAG
Leu
>WENV183506208
OMGY01000309
398829
Bacteroidota
CCT
Arg
>WENV183506391
OMGY01000763
175838
Bacteroidota
GTT
Asn
>WENV183506392
OMGY01000763
175838
Bacteroidota
GTT
Asn
>WENV183506072
OMGY01000099
289031
Bacteroidota
CAT
Met
>WENV183506912
OMGY01004186
289031
Bacteroidota
CAT
Met
>WENV183506029
OMGY01000054
280557
Bacteroidota
CAT
Met
>WENV183506150
OMGY01000201
280557
Bacteroidota
CAT
Met
>WENV183506507
OMGY01001075
20206
Bacteroidota
GGA
Ser
>WENV183506957
OMGY01004714
483416
Bacteroidota
CTG
Gln
>WENV183506477
OMGY01001001
201819
Bacteroidota
CAT
Met
>WENV183506410
OMGY01000807
56493
Bacteroidota
TGA
Ser
>WENV183506070
OMGY01000097
175903
Bacteroidota
GTG
His
>WENV183506025
OMGY01000051
351598
Bacteroidota
CGG
Pro
>WENV183507638
OMGY01040922
291612
Bacteroidota
>WENV183507065
OMGY01006848
172085
Bacteroidota
TAC
Val
>WENV183506670
OMGY01001962
405877
Bacteroidota
GGT
Thr
>WENV183506452
OMGY01000905
182267
Bacteroidota
GTT
Asn
>WENV183507834
OMGY01082005
20449
Bacteroidota
GGA
Ser
>WENV183506569
OMGY01001363
56072
Bacteroidota
TAA
Leu
>WENV183507589
OMGY01034805
175886
Bacteroidota
GGC
Ala
>WENV183506082
OMGY01000105
179697
Bacteroidota
TGT
Thr
>WENV183506231
OMGY01000368
280451
Bacteroidota
CGT
Thr
>WENV183507473
OMGY01024717
418894
Bacteroidota
TTC
Glu
>WENV183506036
OMGY01000061
99847
Bacteroidota
GTA
Tyr
>WENV183506387
OMGY01000748
99847
Bacteroidota
GTA
Tyr
>WENV183506230
OMGY01000364
156078
Bacteroidota
TAC
Val
>WENV183506023
OMGY01000050
186874
Bacteroidota
CAT
Met
>WENV183507561
OMGY01032691
186874
Bacteroidota
CAT
Met
>WENV183506279
OMGY01000473
488746
Bacteroidota
CTG
Gln
>WENV183506506
OMGY01001075
488746
Bacteroidota
CTG
Gln
>WENV183506629
OMGY01001705
27524
Bacteroidota
GGA
Ser
>WENV183507333
OMGY01016085
186108
Bacteroidota
GTT
Asn
>WENV183507176
OMGY01009775
175844
Bacteroidota
GGC
Ala
>WENV183507104
OMGY01007614
183889
Bacteroidota
GGC
Ala
>WENV183507419
OMGY01020825
186142
Bacteroidota
GAT
Ile
>WENV183506116
OMGY01000157
398828
Bacteroidota
CCG
Arg
>WENV183506160
OMGY01000219
398828
Bacteroidota
CCG
Arg
>WENV183507350
OMGY01017047
69204
Bacteroidota
TGA
Ser
>WENV183506027
OMGY01000053
280446
Bacteroidota
TTT
Lys
>WENV183506224
OMGY01000353
280446
Bacteroidota
TTT
Lys
>WENV183506787
OMGY01002888
280446
Bacteroidota
TTT
Lys
>WENV183506611
OMGY01001612
484496
Bacteroidota
TTG
Gln
>WENV183506071
OMGY01000097
27502
Bacteroidota
GGA
Ser
>WENV183507286
OMGY01013984
373714
Bacteroidota
GCC
Gly
>WENV183507230
OMGY01011938
188555
Bacteroidota
CAT
Met
>WENV183506294
OMGY01000497
156467
Bacteroidota
TGG
Pro
>WENV183507744
OMGY01060788
186143
Bacteroidota
TGC
Ala
>WENV183506215
OMGY01000323
416636
Bacteroidota
TTC
Glu
>WENV183506046
OMGY01000072
398836
Bacteroidota
GCA
Cys
>WENV183506463
OMGY01000945
398836
Bacteroidota
GCA
Cys
>WENV183507680
OMGY01047091
156347
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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