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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183507978
OMHA01000148
482907
Bacteroidota
CTG
Gln
>WENV183507997
OMHA01000957
482909
Bacteroidota
TTG
Gln
>WENV183507979
OMHA01000181
185159
Bacteroidota
TCT
Arg
>WENV183507988
OMHA01000479
157146
Bacteroidota
TAC
Val
>WENV183507989
OMHA01000479
157146
Bacteroidota
TAC
Val
>WENV183507983
OMHA01000214
75001
Bacteroidota
CAA
Leu
>WENV183507991
OMHA01000515
404663
Bacteroidota
GGT
Thr
>WENV183507985
OMHA01000248
175886
Bacteroidota
GGC
Ala
>WENV183507972
OMHA01000034
399200
Bacteroidota
CAT
Met
>WENV183507992
OMHA01000559
404661
Bacteroidota
GTG
His
>WENV183507986
OMHA01000253
280478
Bacteroidota
GCC
Gly
>WENV183508039
OMHA01003404
290466
Bacteroidota
CCA
Trp
>WENV183507976
OMHA01000086
158068
Bacteroidota
GGG
Pro
>WENV183507973
OMHA01000035
331443
Bacteroidota
CGT
Thr
>WENV183508011
OMHA01001634
101147
Bacteroidota
CAG
Leu
>WENV183507977
OMHA01000113
56318
Bacteroidota
TGA
Ser
>WENV183507974
OMHA01000062
185161
Bacteroidota
GTT
Asn
>WENV183508028
OMHA01002089
416636
Bacteroidota
TTC
Glu
>WENV183507993
OMHA01000685
290468
Bacteroidota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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