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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183530223
OOAA01000247
117741
Bacteroidota
TAG
Leu
>WENV183530087
OOAA01000019
398829
Bacteroidota
CCT
Arg
>WENV183530384
OOAA01000870
404226
Bacteroidota
CCT
Arg
>WENV183530263
OOAA01000326
400161
Bacteroidota
GGT
Thr
>WENV183530268
OOAA01000342
156422
Bacteroidota
TAC
Val
>WENV183530269
OOAA01000342
156422
Bacteroidota
TAC
Val
>WENV183530270
OOAA01000342
156422
Bacteroidota
TAC
Val
>WENV183530088
OOAA01000020
280557
Bacteroidota
CAT
Met
>WENV183530236
OOAA01000275
280557
Bacteroidota
CAT
Met
>WENV183530179
OOAA01000172
20206
Bacteroidota
GGA
Ser
>WENV183530267
OOAA01000340
201819
Bacteroidota
CAT
Met
>WENV183530125
OOAA01000051
118221
Bacteroidota
CAA
Leu
>WENV183530172
OOAA01000136
56493
Bacteroidota
TGA
Ser
>WENV183530063
OOAA01000003
175903
Bacteroidota
GTG
His
>WENV183530174
OOAA01000143
175903
Bacteroidota
GTG
His
>WENV183530084
OOAA01000016
156068
Bacteroidota
TAC
Val
>WENV183530385
OOAA01000871
118089
Bacteroidota
TAG
Leu
>WENV183530522
OOAA01002155
178571
Bacteroidota
GTT
Asn
>WENV183530718
OOAA01009803
405877
Bacteroidota
GGT
Thr
>WENV183530203
OOAA01000220
56385
Bacteroidota
TGA
Ser
>WENV183530204
OOAA01000220
56385
Bacteroidota
TGA
Ser
>WENV183530446
OOAA01001295
57645
Bacteroidota
TGA
Ser
>WENV183530374
OOAA01000832
182267
Bacteroidota
GTT
Asn
>WENV183530871
OOAA01033587
20449
Bacteroidota
GGA
Ser
>WENV183530264
OOAA01000326
312035
Bacteroidota
CCA
Trp
>WENV183530651
OOAA01007073
178133
Bacteroidota
GAT
Ile
>WENV183530241
OOAA01000283
242241
Bacteroidota
GTC
Asp
>WENV183530242
OOAA01000283
242241
Bacteroidota
GTC
Asp
>WENV183530216
OOAA01000236
56072
Bacteroidota
TAA
Leu
>WENV183530301
OOAA01000456
56072
Bacteroidota
TAA
Leu
>WENV183530151
OOAA01000088
175902
Bacteroidota
GGC
Ala
>WENV183530621
OOAA01005479
280451
Bacteroidota
CGT
Thr
>WENV183530107
OOAA01000036
99847
Bacteroidota
GTA
Tyr
>WENV183530562
OOAA01002638
399200
Bacteroidota
CAT
Met
>WENV183530221
OOAA01000242
404109
Bacteroidota
CTC
Glu
>WENV183530389
OOAA01000900
46648
Bacteroidota
TAA
Leu
>WENV183530178
OOAA01000172
488746
Bacteroidota
CTG
Gln
>WENV183530408
OOAA01001046
187400
Bacteroidota
GTT
Asn
>WENV183530095
OOAA01000029
398828
Bacteroidota
CCG
Arg
>WENV183530538
OOAA01002391
191205
Bacteroidota
TGG
Pro
>WENV183530219
OOAA01000240
140771
Bacteroidota
>WENV183530182
OOAA01000181
481328
Bacteroidota
TTG
Gln
>WENV183530165
OOAA01000119
491385
Bacteroidota
TTG
Gln
>WENV183530347
OOAA01000709
69204
Bacteroidota
TGA
Ser
>WENV183530424
OOAA01001183
280446
Bacteroidota
TTT
Lys
>WENV183530143
OOAA01000080
484496
Bacteroidota
TTG
Gln
>WENV183530372
OOAA01000821
27502
Bacteroidota
GGA
Ser
>WENV183530894
OOAA01039397
416636
Bacteroidota
TTC
Glu
>WENV183530407
OOAA01001045
365112
Bacteroidota
TTT
Lys
>WENV183530527
OOAA01002272
365112
Bacteroidota
TTT
Lys
>WENV183530111
OOAA01000040
398836
Bacteroidota
GCA
Cys
>WENV183530249
OOAA01000298
170323
Bacteroidota
GGG
Pro
>WENV183530297
OOAA01000446
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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