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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183532342
OOAD01000229
117741
Bacteroidota
TAG
Leu
>WENV183532587
OOAD01002442
398829
Bacteroidota
CCT
Arg
>WENV183532570
OOAD01002058
175904
Bacteroidota
CGG
Pro
>WENV183532416
OOAD01000496
400161
Bacteroidota
GGT
Thr
>WENV183532231
OOAD01000030
156422
Bacteroidota
TAC
Val
>WENV183532745
OOAD01007692
280557
Bacteroidota
CAT
Met
>WENV183532700
OOAD01005541
20206
Bacteroidota
GGA
Ser
>WENV183532751
OOAD01007995
118221
Bacteroidota
CAA
Leu
>WENV183532318
OOAD01000181
56493
Bacteroidota
TGA
Ser
>WENV183532532
OOAD01001490
56493
Bacteroidota
TGA
Ser
>WENV183532768
OOAD01009320
56493
Bacteroidota
TGA
Ser
>WENV183532281
OOAD01000091
175903
Bacteroidota
GTG
His
>WENV183532913
OOAD01024350
351598
Bacteroidota
CGG
Pro
>WENV183532240
OOAD01000043
118089
Bacteroidota
TAG
Leu
>WENV183532284
OOAD01000104
203954
Bacteroidota
GTC
Asp
>WENV183532214
OOAD01000014
172085
Bacteroidota
TAC
Val
>WENV183532215
OOAD01000014
172085
Bacteroidota
TAC
Val
>WENV183532232
OOAD01000030
172085
Bacteroidota
TAC
Val
>WENV183532321
OOAD01000189
56385
Bacteroidota
TGA
Ser
>WENV183532510
OOAD01001290
182267
Bacteroidota
GTT
Asn
>WENV183532228
OOAD01000027
20449
Bacteroidota
GGA
Ser
>WENV183532417
OOAD01000496
312035
Bacteroidota
CCA
Trp
>WENV183532493
OOAD01001136
242241
Bacteroidota
GTC
Asp
>WENV183532494
OOAD01001136
242241
Bacteroidota
GTC
Asp
>WENV183532223
OOAD01000020
56072
Bacteroidota
TAA
Leu
>WENV183532212
OOAD01000011
175944
Bacteroidota
CAT
Met
>WENV183532304
OOAD01000144
175902
Bacteroidota
GGC
Ala
>WENV183532280
OOAD01000090
174201
Bacteroidota
GGG
Pro
>WENV183532556
OOAD01001713
174201
Bacteroidota
GGG
Pro
>WENV183532491
OOAD01001123
399200
Bacteroidota
CAT
Met
>WENV183532353
OOAD01000263
404109
Bacteroidota
CTC
Glu
>WENV183532354
OOAD01000263
404109
Bacteroidota
CTC
Glu
>WENV183532437
OOAD01000701
46648
Bacteroidota
TAA
Leu
>WENV183532395
OOAD01000397
488746
Bacteroidota
CTG
Gln
>WENV183532366
OOAD01000296
280478
Bacteroidota
GCC
Gly
>WENV183532926
OOAD01025916
27524
Bacteroidota
GGA
Ser
>WENV183532311
OOAD01000160
398828
Bacteroidota
CCG
Arg
>WENV183532213
OOAD01000012
191205
Bacteroidota
TGG
Pro
>WENV183532271
OOAD01000084
176192
Bacteroidota
TCT
Arg
>WENV183532344
OOAD01000235
481328
Bacteroidota
TTG
Gln
>WENV183532786
OOAD01010843
400088
Bacteroidota
GGT
Thr
>WENV183532659
OOAD01004054
69204
Bacteroidota
TGA
Ser
>WENV183532383
OOAD01000365
484496
Bacteroidota
TTG
Gln
>WENV183532282
OOAD01000091
27502
Bacteroidota
GGA
Ser
>WENV183532358
OOAD01000273
285750
Bacteroidota
CCC
Gly
>WENV183533080
OOAD01066822
373714
Bacteroidota
GCC
Gly
>WENV183532224
OOAD01000021
365112
Bacteroidota
TTT
Lys
>WENV183532257
OOAD01000058
365112
Bacteroidota
TTT
Lys
>WENV183532324
OOAD01000198
365112
Bacteroidota
TTT
Lys
>WENV183532802
OOAD01011690
365112
Bacteroidota
TTT
Lys
>WENV183532256
OOAD01000057
398836
Bacteroidota
GCA
Cys
>WENV183532407
OOAD01000443
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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