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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183538178
OOAH01001865
117741
Bacteroidota
TAG
Leu
>WENV183538344
OOAH01003378
398829
Bacteroidota
CCT
Arg
>WENV183538650
OOAH01022051
404226
Bacteroidota
CCT
Arg
>WENV183538364
OOAH01003671
175904
Bacteroidota
CGG
Pro
>WENV183538626
OOAH01017921
400161
Bacteroidota
GGT
Thr
>WENV183537765
OOAH01000421
289031
Bacteroidota
CAT
Met
>WENV183538241
OOAH01002184
289031
Bacteroidota
CAT
Met
>WENV183537641
OOAH01000243
280557
Bacteroidota
CAT
Met
>WENV183537715
OOAH01000332
280557
Bacteroidota
CAT
Met
>WENV183537790
OOAH01000492
280557
Bacteroidota
CAT
Met
>WENV183537791
OOAH01000492
280557
Bacteroidota
CAT
Met
>WENV183538038
OOAH01001154
20206
Bacteroidota
GGA
Ser
>WENV183537578
OOAH01000170
483416
Bacteroidota
CTG
Gln
>WENV183538065
OOAH01001279
56493
Bacteroidota
TGA
Ser
>WENV183538436
OOAH01004916
56493
Bacteroidota
TGA
Ser
>WENV183538519
OOAH01006927
175903
Bacteroidota
GTG
His
>WENV183538609
OOAH01014415
291612
Bacteroidota
>WENV183538564
OOAH01009268
118089
Bacteroidota
TAG
Leu
>WENV183538513
OOAH01006735
175936
Bacteroidota
CAT
Met
>WENV183537707
OOAH01000321
29791
Bacteroidota
GCT
Ser
>WENV183537829
OOAH01000587
20449
Bacteroidota
GGA
Ser
>WENV183538707
OOAH01034285
312035
Bacteroidota
CCA
Trp
>WENV183537377
OOAH01000026
56072
Bacteroidota
TAA
Leu
>WENV183537512
OOAH01000100
57807
Bacteroidota
TGA
Ser
>WENV183537513
OOAH01000100
57807
Bacteroidota
TGA
Ser
>WENV183537775
OOAH01000443
57807
Bacteroidota
TGA
Ser
>WENV183538012
OOAH01001058
57807
Bacteroidota
TGA
Ser
>WENV183537344
OOAH01000006
175886
Bacteroidota
GGC
Ala
>WENV183538508
OOAH01006514
175902
Bacteroidota
GGC
Ala
>WENV183537345
OOAH01000006
179697
Bacteroidota
TGT
Thr
>WENV183537708
OOAH01000321
398860
Bacteroidota
CTC
Glu
>WENV183538535
OOAH01007350
480404
Bacteroidota
TTG
Gln
>WENV183538596
OOAH01012700
280451
Bacteroidota
CGT
Thr
>WENV183537647
OOAH01000255
418894
Bacteroidota
TTC
Glu
>WENV183537762
OOAH01000417
99847
Bacteroidota
GTA
Tyr
>WENV183537943
OOAH01000843
99847
Bacteroidota
GTA
Tyr
>WENV183538506
OOAH01006408
99847
Bacteroidota
GTA
Tyr
>WENV183537769
OOAH01000423
399200
Bacteroidota
CAT
Met
>WENV183537697
OOAH01000301
186874
Bacteroidota
CAT
Met
>WENV183537880
OOAH01000682
186874
Bacteroidota
CAT
Met
>WENV183538765
OOAH01052102
46648
Bacteroidota
TAA
Leu
>WENV183537951
OOAH01000884
488746
Bacteroidota
CTG
Gln
>WENV183537783
OOAH01000468
399026
Bacteroidota
CCT
Arg
>WENV183538173
OOAH01001821
280478
Bacteroidota
GCC
Gly
>WENV183537768
OOAH01000423
175844
Bacteroidota
GGC
Ala
>WENV183538627
OOAH01018530
73011
Bacteroidota
CAA
Leu
>WENV183537516
OOAH01000101
280515
Bacteroidota
CCA
Trp
>WENV183538014
OOAH01001069
183889
Bacteroidota
GGC
Ala
>WENV183538091
OOAH01001386
183889
Bacteroidota
GGC
Ala
>WENV183537373
OOAH01000024
158068
Bacteroidota
GGG
Pro
>WENV183537551
OOAH01000149
158068
Bacteroidota
GGG
Pro
>WENV183537802
OOAH01000518
158068
Bacteroidota
GGG
Pro
>WENV183537842
OOAH01000617
158068
Bacteroidota
GGG
Pro
>WENV183538320
OOAH01002970
398828
Bacteroidota
CCG
Arg
>WENV183538323
OOAH01003034
74084
Bacteroidota
CAG
Leu
>WENV183537789
OOAH01000484
176192
Bacteroidota
TCT
Arg
>WENV183538534
OOAH01007316
481328
Bacteroidota
TTG
Gln
>WENV183537447
OOAH01000063
280446
Bacteroidota
TTT
Lys
>WENV183537455
OOAH01000067
280446
Bacteroidota
TTT
Lys
>WENV183537884
OOAH01000695
280446
Bacteroidota
TTT
Lys
>WENV183538705
OOAH01033775
280446
Bacteroidota
TTT
Lys
>WENV183537866
OOAH01000662
484496
Bacteroidota
TTG
Gln
>WENV183538171
OOAH01001816
484496
Bacteroidota
TTG
Gln
>WENV183538251
OOAH01002259
285750
Bacteroidota
CCC
Gly
>WENV183538479
OOAH01006032
117804
Bacteroidota
TAG
Leu
>WENV183537348
OOAH01000007
398836
Bacteroidota
GCA
Cys
>WENV183537349
OOAH01000007
398836
Bacteroidota
GCA
Cys
>WENV183537704
OOAH01000318
398836
Bacteroidota
GCA
Cys
>WENV183537748
OOAH01000383
398836
Bacteroidota
GCA
Cys
>WENV183537920
OOAH01000801
398836
Bacteroidota
GCA
Cys
>WENV183537948
OOAH01000859
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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