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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183539521
OOAJ01000005
398829
Bacteroidota
CCT
Arg
>WENV183539692
OOAJ01000179
175838
Bacteroidota
GTT
Asn
>WENV183539941
OOAJ01001127
175838
Bacteroidota
GTT
Asn
>WENV183539612
OOAJ01000078
404226
Bacteroidota
CCT
Arg
>WENV183540458
OOAJ01037404
175904
Bacteroidota
CGG
Pro
>WENV183539900
OOAJ01000885
289031
Bacteroidota
CAT
Met
>WENV183539528
OOAJ01000009
280557
Bacteroidota
CAT
Met
>WENV183539529
OOAJ01000009
280557
Bacteroidota
CAT
Met
>WENV183540146
OOAJ01003381
280557
Bacteroidota
CAT
Met
>WENV183540137
OOAJ01003184
20206
Bacteroidota
GGA
Ser
>WENV183539668
OOAJ01000155
483416
Bacteroidota
CTG
Gln
>WENV183539608
OOAJ01000069
56493
Bacteroidota
TGA
Ser
>WENV183539864
OOAJ01000652
56493
Bacteroidota
TGA
Ser
>WENV183540098
OOAJ01002595
56493
Bacteroidota
TGA
Ser
>WENV183539629
OOAJ01000109
175903
Bacteroidota
GTG
His
>WENV183539879
OOAJ01000773
175903
Bacteroidota
GTG
His
>WENV183539794
OOAJ01000425
351598
Bacteroidota
CGG
Pro
>WENV183539734
OOAJ01000241
156068
Bacteroidota
TAC
Val
>WENV183539735
OOAJ01000241
156068
Bacteroidota
TAC
Val
>WENV183539600
OOAJ01000064
182267
Bacteroidota
GTT
Asn
>WENV183539601
OOAJ01000064
182267
Bacteroidota
GTT
Asn
>WENV183540441
OOAJ01030225
21127
Bacteroidota
GGA
Ser
>WENV183539688
OOAJ01000176
56072
Bacteroidota
TAA
Leu
>WENV183539732
OOAJ01000235
56072
Bacteroidota
TAA
Leu
>WENV183540344
OOAJ01012101
56072
Bacteroidota
TAA
Leu
>WENV183539664
OOAJ01000152
57807
Bacteroidota
TGA
Ser
>WENV183539757
OOAJ01000308
175902
Bacteroidota
GGC
Ala
>WENV183540297
OOAJ01008674
480404
Bacteroidota
TTG
Gln
>WENV183540471
OOAJ01039999
280451
Bacteroidota
CGT
Thr
>WENV183540031
OOAJ01001631
99847
Bacteroidota
GTA
Tyr
>WENV183540197
OOAJ01004467
99847
Bacteroidota
GTA
Tyr
>WENV183540033
OOAJ01001674
186874
Bacteroidota
CAT
Met
>WENV183539511
OOAJ01000002
332896
Bacteroidota
TTT
Lys
>WENV183539531
OOAJ01000009
332896
Bacteroidota
TTT
Lys
>WENV183540281
OOAJ01007754
332896
Bacteroidota
TTT
Lys
>WENV183539591
OOAJ01000052
488746
Bacteroidota
CTG
Gln
>WENV183540046
OOAJ01001864
488746
Bacteroidota
CTG
Gln
>WENV183539860
OOAJ01000639
20766
Bacteroidota
GGA
Ser
>WENV183539867
OOAJ01000690
187400
Bacteroidota
GTT
Asn
>WENV183540374
OOAJ01017990
175844
Bacteroidota
GGC
Ala
>WENV183539527
OOAJ01000009
158068
Bacteroidota
GGG
Pro
>WENV183539570
OOAJ01000036
158068
Bacteroidota
GGG
Pro
>WENV183539592
OOAJ01000052
158068
Bacteroidota
GGG
Pro
>WENV183539827
OOAJ01000534
398828
Bacteroidota
CCG
Arg
>WENV183539937
OOAJ01001113
140771
Bacteroidota
>WENV183539610
OOAJ01000072
280446
Bacteroidota
TTT
Lys
>WENV183539562
OOAJ01000029
484496
Bacteroidota
TTG
Gln
>WENV183539848
OOAJ01000593
484496
Bacteroidota
TTG
Gln
>WENV183539508
OOAJ01000002
398836
Bacteroidota
GCA
Cys
>WENV183539566
OOAJ01000035
398836
Bacteroidota
GCA
Cys
>WENV183539567
OOAJ01000035
398836
Bacteroidota
GCA
Cys
>WENV183539956
OOAJ01001212
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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