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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183542459
OOAM01004148
117741
Bacteroidota
TAG
Leu
>WENV183542677
OOAM01016384
117741
Bacteroidota
TAG
Leu
>WENV183541792
OOAM01000057
398829
Bacteroidota
CCT
Arg
>WENV183542370
OOAM01002781
398829
Bacteroidota
CCT
Arg
>WENV183542392
OOAM01003084
175838
Bacteroidota
GTT
Asn
>WENV183541769
OOAM01000023
404226
Bacteroidota
CCT
Arg
>WENV183541885
OOAM01000185
175904
Bacteroidota
CGG
Pro
>WENV183541728
OOAM01000004
280553
Bacteroidota
TTT
Lys
>WENV183541771
OOAM01000024
280553
Bacteroidota
TTT
Lys
>WENV183541861
OOAM01000145
280557
Bacteroidota
CAT
Met
>WENV183542085
OOAM01000633
280557
Bacteroidota
CAT
Met
>WENV183542206
OOAM01001098
280557
Bacteroidota
CAT
Met
>WENV183541770
OOAM01000023
398871
Bacteroidota
TTC
Glu
>WENV183542102
OOAM01000678
56493
Bacteroidota
TGA
Ser
>WENV183542125
OOAM01000762
56493
Bacteroidota
TGA
Ser
>WENV183541842
OOAM01000125
175906
Bacteroidota
GTG
His
>WENV183542490
OOAM01005091
175903
Bacteroidota
GTG
His
>WENV183541966
OOAM01000334
118089
Bacteroidota
TAG
Leu
>WENV183541886
OOAM01000185
280530
Bacteroidota
CCA
Trp
>WENV183542604
OOAM01009721
175936
Bacteroidota
CAT
Met
>WENV183541734
OOAM01000006
203954
Bacteroidota
GTC
Asp
>WENV183541736
OOAM01000007
178907
Bacteroidota
TCT
Arg
>WENV183541992
OOAM01000377
182267
Bacteroidota
GTT
Asn
>WENV183542323
OOAM01002003
182267
Bacteroidota
GTT
Asn
>WENV183541904
OOAM01000209
20449
Bacteroidota
GGA
Ser
>WENV183541928
OOAM01000230
56072
Bacteroidota
TAA
Leu
>WENV183541968
OOAM01000339
56072
Bacteroidota
TAA
Leu
>WENV183542277
OOAM01001557
57807
Bacteroidota
TGA
Ser
>WENV183542483
OOAM01004948
57807
Bacteroidota
TGA
Ser
>WENV183542415
OOAM01003443
175902
Bacteroidota
GGC
Ala
>WENV183542081
OOAM01000612
480404
Bacteroidota
TTG
Gln
>WENV183542401
OOAM01003171
280451
Bacteroidota
CGT
Thr
>WENV183541955
OOAM01000295
99847
Bacteroidota
GTA
Tyr
>WENV183541747
OOAM01000010
399200
Bacteroidota
CAT
Met
>WENV183542130
OOAM01000785
399200
Bacteroidota
CAT
Met
>WENV183542348
OOAM01002448
488746
Bacteroidota
CTG
Gln
>WENV183541730
OOAM01000005
280478
Bacteroidota
GCC
Gly
>WENV183542213
OOAM01001132
20766
Bacteroidota
GGA
Ser
>WENV183542588
OOAM01008885
175844
Bacteroidota
GGC
Ala
>WENV183541847
OOAM01000127
280532
Bacteroidota
>WENV183541860
OOAM01000144
73011
Bacteroidota
CAA
Leu
>WENV183542275
OOAM01001551
158068
Bacteroidota
GGG
Pro
>WENV183541784
OOAM01000047
158068
Bacteroidota
GGG
Pro
>WENV183541872
OOAM01000164
158068
Bacteroidota
GGG
Pro
>WENV183542247
OOAM01001337
158068
Bacteroidota
GGG
Pro
>WENV183542695
OOAM01019112
398828
Bacteroidota
CCG
Arg
>WENV183541905
OOAM01000209
74084
Bacteroidota
CAG
Leu
>WENV183542015
OOAM01000444
159415
Bacteroidota
TAC
Val
>WENV183541760
OOAM01000015
480325
Bacteroidota
CTG
Gln
>WENV183542658
OOAM01014785
140771
Bacteroidota
>WENV183542131
OOAM01000787
176192
Bacteroidota
TCT
Arg
>WENV183541732
OOAM01000006
400088
Bacteroidota
GGT
Thr
>WENV183542281
OOAM01001584
484496
Bacteroidota
TTG
Gln
>WENV183542353
OOAM01002586
484496
Bacteroidota
TTG
Gln
>WENV183541735
OOAM01000007
285750
Bacteroidota
CCC
Gly
>WENV183541838
OOAM01000122
398836
Bacteroidota
GCA
Cys
>WENV183541839
OOAM01000122
398836
Bacteroidota
GCA
Cys
>WENV183541900
OOAM01000206
398836
Bacteroidota
GCA
Cys
>WENV183541954
OOAM01000290
398836
Bacteroidota
GCA
Cys
>WENV183541973
OOAM01000344
398836
Bacteroidota
GCA
Cys
>WENV183542292
OOAM01001673
398836
Bacteroidota
GCA
Cys
>WENV183542473
OOAM01004560
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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