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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183543315
OOAN01005422
291612
Bacteroidota
>WENV183543524
OOAN01023609
74084
Bacteroidota
CAG
Leu
>WENV183542984
OOAN01000462
289031
Bacteroidota
CAT
Met
>WENV183543114
OOAN01001064
280557
Bacteroidota
CAT
Met
>WENV183543429
OOAN01012961
399200
Bacteroidota
CAT
Met
>WENV183542886
OOAN01000156
186874
Bacteroidota
CAT
Met
>WENV183543317
OOAN01005581
188555
Bacteroidota
CAT
Met
>WENV183542931
OOAN01000273
280515
Bacteroidota
CCA
Trp
>WENV183543449
OOAN01015334
295349
Bacteroidota
CCA
Trp
>WENV183542860
OOAN01000097
398828
Bacteroidota
CCG
Arg
>WENV183543196
OOAN01002057
398828
Bacteroidota
CCG
Arg
>WENV183543179
OOAN01001705
398829
Bacteroidota
CCT
Arg
>WENV183542850
OOAN01000077
351598
Bacteroidota
CGG
Pro
>WENV183543313
OOAN01005237
280451
Bacteroidota
CGT
Thr
>WENV183543181
OOAN01001748
398860
Bacteroidota
CTC
Glu
>WENV183542838
OOAN01000042
483416
Bacteroidota
CTG
Gln
>WENV183543175
OOAN01001630
483416
Bacteroidota
CTG
Gln
>WENV183542812
OOAN01000017
488746
Bacteroidota
CTG
Gln
>WENV183543539
OOAN01028927
480318
Bacteroidota
CTG
Gln
>WENV183543373
OOAN01008473
231777
Bacteroidota
GAT
Ile
>WENV183543369
OOAN01008411
186142
Bacteroidota
GAT
Ile
>WENV183542845
OOAN01000063
398836
Bacteroidota
GCA
Cys
>WENV183543239
OOAN01002867
398836
Bacteroidota
GCA
Cys
>WENV183543523
OOAN01023609
280478
Bacteroidota
GCC
Gly
>WENV183542973
OOAN01000418
373714
Bacteroidota
GCC
Gly
>WENV183543277
OOAN01003892
29791
Bacteroidota
GCT
Ser
>WENV183542813
OOAN01000017
27524
Bacteroidota
GGA
Ser
>WENV183543023
OOAN01000598
27502
Bacteroidota
GGA
Ser
>WENV183542916
OOAN01000232
175886
Bacteroidota
GGC
Ala
>WENV183543461
OOAN01016554
175844
Bacteroidota
GGC
Ala
>WENV183543209
OOAN01002233
183889
Bacteroidota
GGC
Ala
>WENV183542814
OOAN01000017
174201
Bacteroidota
GGG
Pro
>WENV183542976
OOAN01000424
174201
Bacteroidota
GGG
Pro
>WENV183543409
OOAN01010918
405877
Bacteroidota
GGT
Thr
>WENV183542815
OOAN01000022
99847
Bacteroidota
GTA
Tyr
>WENV183542982
OOAN01000455
99847
Bacteroidota
GTA
Tyr
>WENV183543268
OOAN01003618
99847
Bacteroidota
GTA
Tyr
>WENV183542805
OOAN01000012
175903
Bacteroidota
GTG
His
>WENV183542896
OOAN01000182
175903
Bacteroidota
GTG
His
>WENV183543124
OOAN01001154
182267
Bacteroidota
GTT
Asn
>WENV183542829
OOAN01000037
187400
Bacteroidota
GTT
Asn
>WENV183543265
OOAN01003500
56072
Bacteroidota
TAA
Leu
>WENV183543141
OOAN01001377
56072
Bacteroidota
TAA
Leu
>WENV183542837
OOAN01000041
157895
Bacteroidota
TAC
Val
>WENV183542889
OOAN01000167
172085
Bacteroidota
TAC
Val
>WENV183542922
OOAN01000263
159415
Bacteroidota
TAC
Val
>WENV183543338
OOAN01006836
117741
Bacteroidota
TAG
Leu
>WENV183543465
OOAN01017164
117741
Bacteroidota
TAG
Leu
>WENV183543572
OOAN01041696
118089
Bacteroidota
TAG
Leu
>WENV183542987
OOAN01000470
178907
Bacteroidota
TCT
Arg
>WENV183543192
OOAN01001897
176192
Bacteroidota
TCT
Arg
>WENV183542800
OOAN01000007
56493
Bacteroidota
TGA
Ser
>WENV183543233
OOAN01002765
69204
Bacteroidota
TGA
Ser
>WENV183543370
OOAN01008411
186143
Bacteroidota
TGC
Ala
>WENV183543238
OOAN01002853
179697
Bacteroidota
TGT
Thr
>WENV183543488
OOAN01019938
398871
Bacteroidota
TTC
Glu
>WENV183543117
OOAN01001107
418894
Bacteroidota
TTC
Glu
>WENV183543349
OOAN01007285
480404
Bacteroidota
TTG
Gln
>WENV183542847
OOAN01000065
484496
Bacteroidota
TTG
Gln
>WENV183542892
OOAN01000169
285360
Bacteroidota
TTT
Lys
>WENV183543125
OOAN01001162
285360
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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