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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183546752
OOAU01000014
351598
Bacteroidota
CGG
Pro
>WENV183546765
OOAU01000020
56072
Bacteroidota
TAA
Leu
>WENV183546802
OOAU01000050
174201
Bacteroidota
GGG
Pro
>WENV183546803
OOAU01000050
365112
Bacteroidota
TTT
Lys
>WENV183546834
OOAU01000069
56493
Bacteroidota
TGA
Ser
>WENV183546836
OOAU01000069
140771
Bacteroidota
>WENV183546840
OOAU01000073
365112
Bacteroidota
TTT
Lys
>WENV183546841
OOAU01000074
175844
Bacteroidota
GGC
Ala
>WENV183546852
OOAU01000091
182267
Bacteroidota
GTT
Asn
>WENV183546854
OOAU01000103
351598
Bacteroidota
CGG
Pro
>WENV183546861
OOAU01000112
174201
Bacteroidota
GGG
Pro
>WENV183546862
OOAU01000113
182267
Bacteroidota
GTT
Asn
>WENV183546869
OOAU01000114
280557
Bacteroidota
CAT
Met
>WENV183546884
OOAU01000143
398836
Bacteroidota
GCA
Cys
>WENV183546896
OOAU01000164
365112
Bacteroidota
TTT
Lys
>WENV183546899
OOAU01000172
69204
Bacteroidota
TGA
Ser
>WENV183546932
OOAU01000297
484496
Bacteroidota
TTG
Gln
>WENV183546944
OOAU01000324
365112
Bacteroidota
TTT
Lys
>WENV183546955
OOAU01000362
398829
Bacteroidota
CCT
Arg
>WENV183546956
OOAU01000365
56493
Bacteroidota
TGA
Ser
>WENV183546969
OOAU01000386
365112
Bacteroidota
TTT
Lys
>WENV183546976
OOAU01000415
56493
Bacteroidota
TGA
Ser
>WENV183547027
OOAU01000685
351598
Bacteroidota
CGG
Pro
>WENV183547039
OOAU01000767
56072
Bacteroidota
TAA
Leu
>WENV183547082
OOAU01000966
365112
Bacteroidota
TTT
Lys
>WENV183547142
OOAU01001445
365112
Bacteroidota
TTT
Lys
>WENV183547148
OOAU01001483
398836
Bacteroidota
GCA
Cys
>WENV183547149
OOAU01001483
398836
Bacteroidota
GCA
Cys
>WENV183547181
OOAU01002147
280557
Bacteroidota
CAT
Met
>WENV183547182
OOAU01002147
280557
Bacteroidota
CAT
Met
>WENV183547184
OOAU01002156
365112
Bacteroidota
TTT
Lys
>WENV183547211
OOAU01002662
398836
Bacteroidota
GCA
Cys
>WENV183547212
OOAU01002664
398836
Bacteroidota
GCA
Cys
>WENV183547215
OOAU01002715
174201
Bacteroidota
GGG
Pro
>WENV183547248
OOAU01004185
280557
Bacteroidota
CAT
Met
>WENV183547295
OOAU01005485
69204
Bacteroidota
TGA
Ser
>WENV183547325
OOAU01007794
484496
Bacteroidota
TTG
Gln
>WENV183547493
OOAU01032047
29791
Bacteroidota
GCT
Ser
>WENV183547494
OOAU01032047
398860
Bacteroidota
CTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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