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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183548498
OOAY01000015
172207
Bacteroidota
GGG
Pro
>WENV183548744
OOAY01001018
172207
Bacteroidota
GGG
Pro
>WENV183548752
OOAY01001160
172207
Bacteroidota
GGG
Pro
>WENV183548759
OOAY01001316
172207
Bacteroidota
GGG
Pro
>WENV183548710
OOAY01000594
117741
Bacteroidota
TAG
Leu
>WENV183548781
OOAY01001511
117741
Bacteroidota
TAG
Leu
>WENV183548499
OOAY01000016
398829
Bacteroidota
CCT
Arg
>WENV183548719
OOAY01000665
398829
Bacteroidota
CCT
Arg
>WENV183548725
OOAY01000765
398829
Bacteroidota
CCT
Arg
>WENV183548704
OOAY01000568
175838
Bacteroidota
GTT
Asn
>WENV183548705
OOAY01000568
175838
Bacteroidota
GTT
Asn
>WENV183548615
OOAY01000202
280557
Bacteroidota
CAT
Met
>WENV183548628
OOAY01000237
280557
Bacteroidota
CAT
Met
>WENV183548666
OOAY01000344
280557
Bacteroidota
CAT
Met
>WENV183548588
OOAY01000139
20492
Bacteroidota
GGA
Ser
>WENV183548742
OOAY01000995
20206
Bacteroidota
GGA
Ser
>WENV183548745
OOAY01001024
201819
Bacteroidota
CAT
Met
>WENV183548577
OOAY01000120
56493
Bacteroidota
TGA
Ser
>WENV183548589
OOAY01000143
56493
Bacteroidota
TGA
Ser
>WENV183548738
OOAY01000953
56493
Bacteroidota
TGA
Ser
>WENV183548683
OOAY01000449
175903
Bacteroidota
GTG
His
>WENV183548537
OOAY01000052
351598
Bacteroidota
CGG
Pro
>WENV183548575
OOAY01000118
351598
Bacteroidota
CGG
Pro
>WENV183548591
OOAY01000144
351598
Bacteroidota
CGG
Pro
>WENV183548715
OOAY01000633
351598
Bacteroidota
CGG
Pro
>WENV183548961
OOAY01016346
56385
Bacteroidota
TGA
Ser
>WENV183548612
OOAY01000193
29791
Bacteroidota
GCT
Ser
>WENV183548540
OOAY01000053
56072
Bacteroidota
TAA
Leu
>WENV183548718
OOAY01000659
56072
Bacteroidota
TAA
Leu
>WENV183548584
OOAY01000134
175902
Bacteroidota
GGC
Ala
>WENV183548760
OOAY01001320
175902
Bacteroidota
GGC
Ala
>WENV183548613
OOAY01000193
398860
Bacteroidota
CTC
Glu
>WENV183548616
OOAY01000204
280451
Bacteroidota
CGT
Thr
>WENV183548625
OOAY01000224
99847
Bacteroidota
GTA
Tyr
>WENV183548682
OOAY01000446
99847
Bacteroidota
GTA
Tyr
>WENV183548713
OOAY01000622
99847
Bacteroidota
GTA
Tyr
>WENV183548805
OOAY01001780
488746
Bacteroidota
CTG
Gln
>WENV183548583
OOAY01000132
175844
Bacteroidota
GGC
Ala
>WENV183548702
OOAY01000551
398828
Bacteroidota
CCG
Arg
>WENV183548730
OOAY01000875
140771
Bacteroidota
>WENV183548531
OOAY01000047
176192
Bacteroidota
TCT
Arg
>WENV183548557
OOAY01000085
69204
Bacteroidota
TGA
Ser
>WENV183548673
OOAY01000381
69204
Bacteroidota
TGA
Ser
>WENV183548727
OOAY01000847
69204
Bacteroidota
TGA
Ser
>WENV183548535
OOAY01000051
280446
Bacteroidota
TTT
Lys
>WENV183548643
OOAY01000263
280446
Bacteroidota
TTT
Lys
>WENV183548695
OOAY01000480
280446
Bacteroidota
TTT
Lys
>WENV183548772
OOAY01001467
280446
Bacteroidota
TTT
Lys
>WENV183548861
OOAY01002623
280446
Bacteroidota
TTT
Lys
>WENV183548550
OOAY01000072
484496
Bacteroidota
TTG
Gln
>WENV183548658
OOAY01000308
484496
Bacteroidota
TTG
Gln
>WENV183548660
OOAY01000320
484496
Bacteroidota
TTG
Gln
>WENV183548761
OOAY01001324
484496
Bacteroidota
TTG
Gln
>WENV183548552
OOAY01000078
27502
Bacteroidota
GGA
Ser
>WENV183548714
OOAY01000626
27502
Bacteroidota
GGA
Ser
>WENV183548529
OOAY01000046
365112
Bacteroidota
TTT
Lys
>WENV183548665
OOAY01000341
365112
Bacteroidota
TTT
Lys
>WENV183548830
OOAY01002203
365112
Bacteroidota
TTT
Lys
>WENV183548502
OOAY01000018
398836
Bacteroidota
GCA
Cys
>WENV183548560
OOAY01000096
398836
Bacteroidota
GCA
Cys
>WENV183548567
OOAY01000102
398836
Bacteroidota
GCA
Cys
>WENV183548706
OOAY01000572
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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