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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183553821
OOBM01000085
117741
Bacteroidota
TAG
Leu
>WENV183553720
OOBM01000004
398829
Bacteroidota
CCT
Arg
>WENV183554229
OOBM01001881
175904
Bacteroidota
CGG
Pro
>WENV183553759
OOBM01000022
400161
Bacteroidota
GGT
Thr
>WENV183553783
OOBM01000038
289031
Bacteroidota
CAT
Met
>WENV183553904
OOBM01000232
280557
Bacteroidota
CAT
Met
>WENV183553748
OOBM01000016
20206
Bacteroidota
GGA
Ser
>WENV183553705
OOBM01000001
483416
Bacteroidota
CTG
Gln
>WENV183554083
OOBM01000818
118221
Bacteroidota
CAA
Leu
>WENV183553933
OOBM01000288
56493
Bacteroidota
TGA
Ser
>WENV183553803
OOBM01000067
175903
Bacteroidota
GTG
His
>WENV183553810
OOBM01000075
118089
Bacteroidota
TAG
Leu
>WENV183553838
OOBM01000093
175936
Bacteroidota
CAT
Met
>WENV183554045
OOBM01000620
203954
Bacteroidota
GTC
Asp
>WENV183554467
OOBM01014931
178907
Bacteroidota
TCT
Arg
>WENV183553755
OOBM01000020
56385
Bacteroidota
TGA
Ser
>WENV183553860
OOBM01000135
20449
Bacteroidota
GGA
Ser
>WENV183553760
OOBM01000022
312035
Bacteroidota
CCA
Trp
>WENV183553719
OOBM01000004
56072
Bacteroidota
TAA
Leu
>WENV183553862
OOBM01000136
57807
Bacteroidota
TGA
Ser
>WENV183553874
OOBM01000170
57807
Bacteroidota
TGA
Ser
>WENV183554284
OOBM01002699
175902
Bacteroidota
GGC
Ala
>WENV183553868
OOBM01000158
398860
Bacteroidota
CTC
Glu
>WENV183553774
OOBM01000035
480404
Bacteroidota
TTG
Gln
>WENV183553797
OOBM01000063
280451
Bacteroidota
CGT
Thr
>WENV183553885
OOBM01000187
99847
Bacteroidota
GTA
Tyr
>WENV183554028
OOBM01000550
99847
Bacteroidota
GTA
Tyr
>WENV183554161
OOBM01001202
399200
Bacteroidota
CAT
Met
>WENV183553875
OOBM01000177
404109
Bacteroidota
CTC
Glu
>WENV183554249
OOBM01002004
404109
Bacteroidota
CTC
Glu
>WENV183553723
OOBM01000007
186874
Bacteroidota
CAT
Met
>WENV183553870
OOBM01000162
46648
Bacteroidota
TAA
Leu
>WENV183553727
OOBM01000008
332896
Bacteroidota
TTT
Lys
>WENV183553843
OOBM01000099
332896
Bacteroidota
TTT
Lys
>WENV183553891
OOBM01000201
332896
Bacteroidota
TTT
Lys
>WENV183553747
OOBM01000016
488746
Bacteroidota
CTG
Gln
>WENV183553895
OOBM01000215
399026
Bacteroidota
CCT
Arg
>WENV183553888
OOBM01000193
280478
Bacteroidota
GCC
Gly
>WENV183553935
OOBM01000298
20766
Bacteroidota
GGA
Ser
>WENV183553809
OOBM01000073
280532
Bacteroidota
>WENV183553876
OOBM01000177
187814
Bacteroidota
GTC
Asp
>WENV183553877
OOBM01000177
187814
Bacteroidota
GTC
Asp
>WENV183553725
OOBM01000008
480318
Bacteroidota
CTG
Gln
>WENV183553746
OOBM01000016
158068
Bacteroidota
GGG
Pro
>WENV183554256
OOBM01002074
158068
Bacteroidota
GGG
Pro
>WENV183554407
OOBM01008351
186142
Bacteroidota
GAT
Ile
>WENV183553794
OOBM01000060
398828
Bacteroidota
CCG
Arg
>WENV183554574
OOBM01040568
74084
Bacteroidota
CAG
Leu
>WENV183554289
OOBM01002795
159415
Bacteroidota
TAC
Val
>WENV183553866
OOBM01000147
176192
Bacteroidota
TCT
Arg
>WENV183554128
OOBM01001021
176192
Bacteroidota
TCT
Arg
>WENV183553869
OOBM01000162
481328
Bacteroidota
TTG
Gln
>WENV183553973
OOBM01000395
280446
Bacteroidota
TTT
Lys
>WENV183553936
OOBM01000304
484496
Bacteroidota
TTG
Gln
>WENV183553988
OOBM01000439
484496
Bacteroidota
TTG
Gln
>WENV183553786
OOBM01000040
285750
Bacteroidota
CCC
Gly
>WENV183553738
OOBM01000010
117804
Bacteroidota
TAG
Leu
>WENV183554408
OOBM01008351
186143
Bacteroidota
TGC
Ala
>WENV183553844
OOBM01000105
398836
Bacteroidota
GCA
Cys
>WENV183553856
OOBM01000128
398836
Bacteroidota
GCA
Cys
>WENV183553899
OOBM01000226
398836
Bacteroidota
GCA
Cys
>WENV183553964
OOBM01000367
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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