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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183558129
OOBR01000013
295385
Bacteroidota
CCA
Trp
>WENV183558145
OOBR01000020
285360
Bacteroidota
TTT
Lys
>WENV183558399
OOBR01000283
117741
Bacteroidota
TAG
Leu
>WENV183558669
OOBR01002307
398829
Bacteroidota
CCT
Arg
>WENV183558497
OOBR01000531
404226
Bacteroidota
CCT
Arg
>WENV183558213
OOBR01000067
175904
Bacteroidota
CGG
Pro
>WENV183558488
OOBR01000519
289031
Bacteroidota
CAT
Met
>WENV183558479
OOBR01000474
280557
Bacteroidota
CAT
Met
>WENV183558309
OOBR01000180
20206
Bacteroidota
GGA
Ser
>WENV183558356
OOBR01000209
483416
Bacteroidota
CTG
Gln
>WENV183558821
OOBR01009393
398871
Bacteroidota
TTC
Glu
>WENV183558335
OOBR01000195
56493
Bacteroidota
TGA
Ser
>WENV183558383
OOBR01000243
56493
Bacteroidota
TGA
Ser
>WENV183558703
OOBR01003129
175906
Bacteroidota
GTG
His
>WENV183558384
OOBR01000243
175903
Bacteroidota
GTG
His
>WENV183558110
OOBR01000002
351598
Bacteroidota
CGG
Pro
>WENV183558368
OOBR01000226
351598
Bacteroidota
CGG
Pro
>WENV183558965
OOBR01032917
291612
Bacteroidota
>WENV183558203
OOBR01000052
118089
Bacteroidota
TAG
Leu
>WENV183558660
OOBR01002021
118089
Bacteroidota
TAG
Leu
>WENV183558134
OOBR01000014
398872
Bacteroidota
GGT
Thr
>WENV183558796
OOBR01007551
280530
Bacteroidota
CCA
Trp
>WENV183558797
OOBR01007693
203954
Bacteroidota
GTC
Asp
>WENV183558648
OOBR01001895
178907
Bacteroidota
TCT
Arg
>WENV183558820
OOBR01009346
405877
Bacteroidota
GGT
Thr
>WENV183558408
OOBR01000319
29791
Bacteroidota
GCT
Ser
>WENV183558391
OOBR01000250
20449
Bacteroidota
GGA
Ser
>WENV183558768
OOBR01006102
56072
Bacteroidota
TAA
Leu
>WENV183558252
OOBR01000101
175902
Bacteroidota
GGC
Ala
>WENV183558409
OOBR01000319
398860
Bacteroidota
CTC
Glu
>WENV183558310
OOBR01000180
174201
Bacteroidota
GGG
Pro
>WENV183558400
OOBR01000287
174201
Bacteroidota
GGG
Pro
>WENV183558153
OOBR01000025
280451
Bacteroidota
CGT
Thr
>WENV183558812
OOBR01008575
280451
Bacteroidota
CGT
Thr
>WENV183558113
OOBR01000003
99847
Bacteroidota
GTA
Tyr
>WENV183558302
OOBR01000172
99847
Bacteroidota
GTA
Tyr
>WENV183558432
OOBR01000356
399200
Bacteroidota
CAT
Met
>WENV183558574
OOBR01001098
399200
Bacteroidota
CAT
Met
>WENV183558402
OOBR01000305
186874
Bacteroidota
CAT
Met
>WENV183558308
OOBR01000180
488746
Bacteroidota
CTG
Gln
>WENV183558500
OOBR01000537
488746
Bacteroidota
CTG
Gln
>WENV183558414
OOBR01000334
280478
Bacteroidota
GCC
Gly
>WENV183558225
OOBR01000084
27524
Bacteroidota
GGA
Ser
>WENV183558762
OOBR01005873
175844
Bacteroidota
GGC
Ala
>WENV183558577
OOBR01001132
73011
Bacteroidota
CAA
Leu
>WENV183558904
OOBR01019575
183889
Bacteroidota
GGC
Ala
>WENV183558719
OOBR01003632
186142
Bacteroidota
GAT
Ile
>WENV183558307
OOBR01000179
398828
Bacteroidota
CCG
Arg
>WENV183558465
OOBR01000443
398828
Bacteroidota
CCG
Arg
>WENV183558836
OOBR01010210
74084
Bacteroidota
CAG
Leu
>WENV183558792
OOBR01007404
480325
Bacteroidota
CTG
Gln
>WENV183558379
OOBR01000234
176192
Bacteroidota
TCT
Arg
>WENV183558664
OOBR01002150
176192
Bacteroidota
TCT
Arg
>WENV183558860
OOBR01013053
400088
Bacteroidota
GGT
Thr
>WENV183558344
OOBR01000205
69204
Bacteroidota
TGA
Ser
>WENV183558346
OOBR01000205
69204
Bacteroidota
TGA
Ser
>WENV183558191
OOBR01000045
280446
Bacteroidota
TTT
Lys
>WENV183558392
OOBR01000251
280446
Bacteroidota
TTT
Lys
>WENV183558144
OOBR01000019
484496
Bacteroidota
TTG
Gln
>WENV183558558
OOBR01000923
484496
Bacteroidota
TTG
Gln
>WENV183558569
OOBR01001052
484496
Bacteroidota
TTG
Gln
>WENV183558345
OOBR01000205
27502
Bacteroidota
GGA
Ser
>WENV183558464
OOBR01000433
27502
Bacteroidota
GGA
Ser
>WENV183558720
OOBR01003632
186143
Bacteroidota
TGC
Ala
>WENV183558116
OOBR01000005
365112
Bacteroidota
TTT
Lys
>WENV183558737
OOBR01004318
365112
Bacteroidota
TTT
Lys
>WENV183558246
OOBR01000100
398836
Bacteroidota
GCA
Cys
>WENV183558359
OOBR01000212
398836
Bacteroidota
GCA
Cys
>WENV183558694
OOBR01002908
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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