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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183559571
OOBT01000083
400161
Bacteroidota
GGT
Thr
>WENV183559748
OOBT01000712
400161
Bacteroidota
GGT
Thr
>WENV183559653
OOBT01000311
289031
Bacteroidota
CAT
Met
>WENV183559999
OOBT01003092
483416
Bacteroidota
CTG
Gln
>WENV183559583
OOBT01000124
201819
Bacteroidota
CAT
Met
>WENV183559908
OOBT01001983
118221
Bacteroidota
CAA
Leu
>WENV183559874
OOBT01001669
56493
Bacteroidota
TGA
Ser
>WENV183560059
OOBT01004469
175903
Bacteroidota
GTG
His
>WENV183560020
OOBT01003579
156068
Bacteroidota
TAC
Val
>WENV183560376
OOBT01032029
178907
Bacteroidota
TCT
Arg
>WENV183559735
OOBT01000628
56385
Bacteroidota
TGA
Ser
>WENV183559519
OOBT01000003
182267
Bacteroidota
GTT
Asn
>WENV183559755
OOBT01000753
182267
Bacteroidota
GTT
Asn
>WENV183559572
OOBT01000083
312035
Bacteroidota
CCA
Trp
>WENV183559661
OOBT01000340
242241
Bacteroidota
GTC
Asp
>WENV183560006
OOBT01003205
242241
Bacteroidota
GTC
Asp
>WENV183559549
OOBT01000043
56072
Bacteroidota
TAA
Leu
>WENV183559683
OOBT01000379
56072
Bacteroidota
TAA
Leu
>WENV183559634
OOBT01000248
57807
Bacteroidota
TGA
Ser
>WENV183560281
OOBT01016733
175902
Bacteroidota
GGC
Ala
>WENV183559899
OOBT01001885
280451
Bacteroidota
CGT
Thr
>WENV183560394
OOBT01034983
399200
Bacteroidota
CAT
Met
>WENV183559582
OOBT01000117
186874
Bacteroidota
CAT
Met
>WENV183559887
OOBT01001694
46648
Bacteroidota
TAA
Leu
>WENV183559843
OOBT01001389
178179
Bacteroidota
GGC
Ala
>WENV183560018
OOBT01003520
280478
Bacteroidota
GCC
Gly
>WENV183560255
OOBT01013467
398828
Bacteroidota
CCG
Arg
>WENV183559525
OOBT01000014
191205
Bacteroidota
TGG
Pro
>WENV183559773
OOBT01000901
140771
Bacteroidota
>WENV183559594
OOBT01000149
481328
Bacteroidota
TTG
Gln
>WENV183559734
OOBT01000624
491385
Bacteroidota
TTG
Gln
>WENV183560085
OOBT01005070
484496
Bacteroidota
TTG
Gln
>WENV183559556
OOBT01000059
365112
Bacteroidota
TTT
Lys
>WENV183559644
OOBT01000274
365112
Bacteroidota
TTT
Lys
>WENV183559707
OOBT01000454
365112
Bacteroidota
TTT
Lys
>WENV183559720
OOBT01000549
365112
Bacteroidota
TTT
Lys
>WENV183559726
OOBT01000581
398836
Bacteroidota
GCA
Cys
>WENV183559557
OOBT01000059
170323
Bacteroidota
GGG
Pro
>WENV183559599
OOBT01000157
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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