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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183560732
OOBU01000548
285360
Bacteroidota
TTT
Lys
>WENV183560485
OOBU01000031
400161
Bacteroidota
GGT
Thr
>WENV183560703
OOBU01000433
280557
Bacteroidota
CAT
Met
>WENV183560706
OOBU01000442
280557
Bacteroidota
CAT
Met
>WENV183560707
OOBU01000442
280557
Bacteroidota
CAT
Met
>WENV183560487
OOBU01000032
118221
Bacteroidota
CAA
Leu
>WENV183560582
OOBU01000155
56493
Bacteroidota
TGA
Ser
>WENV183560620
OOBU01000212
56493
Bacteroidota
TGA
Ser
>WENV183560779
OOBU01000759
56493
Bacteroidota
TGA
Ser
>WENV183560793
OOBU01000804
56493
Bacteroidota
TGA
Ser
>WENV183560756
OOBU01000628
351598
Bacteroidota
CGG
Pro
>WENV183560807
OOBU01000874
351598
Bacteroidota
CGG
Pro
>WENV183560523
OOBU01000073
56385
Bacteroidota
TGA
Ser
>WENV183560755
OOBU01000624
182267
Bacteroidota
GTT
Asn
>WENV183560942
OOBU01002750
182267
Bacteroidota
GTT
Asn
>WENV183560943
OOBU01002750
182267
Bacteroidota
GTT
Asn
>WENV183560486
OOBU01000031
312035
Bacteroidota
CCA
Trp
>WENV183560510
OOBU01000063
242241
Bacteroidota
GTC
Asp
>WENV183560511
OOBU01000063
242241
Bacteroidota
GTC
Asp
>WENV183560512
OOBU01000063
242241
Bacteroidota
GTC
Asp
>WENV183560619
OOBU01000211
56072
Bacteroidota
TAA
Leu
>WENV183560874
OOBU01001722
56072
Bacteroidota
TAA
Leu
>WENV183560986
OOBU01004472
175902
Bacteroidota
GGC
Ala
>WENV183560567
OOBU01000127
404109
Bacteroidota
CTC
Glu
>WENV183560568
OOBU01000127
404109
Bacteroidota
CTC
Glu
>WENV183560461
OOBU01000009
46648
Bacteroidota
TAA
Leu
>WENV183561015
OOBU01006663
488746
Bacteroidota
CTG
Gln
>WENV183560781
OOBU01000759
140771
Bacteroidota
>WENV183560463
OOBU01000009
481328
Bacteroidota
TTG
Gln
>WENV183560553
OOBU01000115
69204
Bacteroidota
TGA
Ser
>WENV183560808
OOBU01000882
69204
Bacteroidota
TGA
Ser
>WENV183560666
OOBU01000323
280446
Bacteroidota
TTT
Lys
>WENV183560948
OOBU01002859
484496
Bacteroidota
TTG
Gln
>WENV183560476
OOBU01000016
365112
Bacteroidota
TTT
Lys
>WENV183560518
OOBU01000066
365112
Bacteroidota
TTT
Lys
>WENV183560633
OOBU01000243
365112
Bacteroidota
TTT
Lys
>WENV183560634
OOBU01000254
365112
Bacteroidota
TTT
Lys
>WENV183560985
OOBU01004451
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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