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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183561984
OOBV01014795
285360
Bacteroidota
TTT
Lys
>WENV183561293
OOBV01000214
117741
Bacteroidota
TAG
Leu
>WENV183561209
OOBV01000096
398829
Bacteroidota
CCT
Arg
>WENV183561389
OOBV01000436
175838
Bacteroidota
GTT
Asn
>WENV183561390
OOBV01000436
175838
Bacteroidota
GTT
Asn
>WENV183561870
OOBV01007132
404226
Bacteroidota
CCT
Arg
>WENV183561635
OOBV01001427
280553
Bacteroidota
TTT
Lys
>WENV183561252
OOBV01000147
280557
Bacteroidota
CAT
Met
>WENV183561329
OOBV01000296
280557
Bacteroidota
CAT
Met
>WENV183561455
OOBV01000648
20206
Bacteroidota
GGA
Ser
>WENV183562130
OOBV01044324
398871
Bacteroidota
TTC
Glu
>WENV183561127
OOBV01000029
56493
Bacteroidota
TGA
Ser
>WENV183561532
OOBV01000910
56493
Bacteroidota
TGA
Ser
>WENV183561068
OOBV01000003
175903
Bacteroidota
GTG
His
>WENV183561430
OOBV01000550
351598
Bacteroidota
CGG
Pro
>WENV183561772
OOBV01003426
351598
Bacteroidota
CGG
Pro
>WENV183562178
OOBV01056602
291612
Bacteroidota
>WENV183561118
OOBV01000020
118089
Bacteroidota
TAG
Leu
>WENV183561573
OOBV01001133
118089
Bacteroidota
TAG
Leu
>WENV183562017
OOBV01018123
280530
Bacteroidota
CCA
Trp
>WENV183561590
OOBV01001183
203954
Bacteroidota
GTC
Asp
>WENV183561618
OOBV01001337
178907
Bacteroidota
TCT
Arg
>WENV183561236
OOBV01000114
182267
Bacteroidota
GTT
Asn
>WENV183561237
OOBV01000114
182267
Bacteroidota
GTT
Asn
>WENV183561165
OOBV01000069
20449
Bacteroidota
GGA
Ser
>WENV183561211
OOBV01000096
56072
Bacteroidota
TAA
Leu
>WENV183561296
OOBV01000217
56072
Bacteroidota
TAA
Leu
>WENV183561432
OOBV01000562
56072
Bacteroidota
TAA
Leu
>WENV183561135
OOBV01000037
175902
Bacteroidota
GGC
Ala
>WENV183561110
OOBV01000014
174201
Bacteroidota
GGG
Pro
>WENV183561149
OOBV01000050
174201
Bacteroidota
GGG
Pro
>WENV183561124
OOBV01000027
280451
Bacteroidota
CGT
Thr
>WENV183561129
OOBV01000031
99847
Bacteroidota
GTA
Tyr
>WENV183561868
OOBV01007030
99847
Bacteroidota
GTA
Tyr
>WENV183561112
OOBV01000015
399200
Bacteroidota
CAT
Met
>WENV183561472
OOBV01000706
399200
Bacteroidota
CAT
Met
>WENV183561540
OOBV01000987
399200
Bacteroidota
CAT
Met
>WENV183561419
OOBV01000525
488746
Bacteroidota
CTG
Gln
>WENV183561304
OOBV01000244
280478
Bacteroidota
GCC
Gly
>WENV183561368
OOBV01000381
280478
Bacteroidota
GCC
Gly
>WENV183561370
OOBV01000381
280478
Bacteroidota
GCC
Gly
>WENV183561140
OOBV01000043
27524
Bacteroidota
GGA
Ser
>WENV183562074
OOBV01028828
175844
Bacteroidota
GGC
Ala
>WENV183561746
OOBV01002708
73011
Bacteroidota
CAA
Leu
>WENV183561242
OOBV01000125
398828
Bacteroidota
CCG
Arg
>WENV183561380
OOBV01000412
398828
Bacteroidota
CCG
Arg
>WENV183561702
OOBV01001995
74084
Bacteroidota
CAG
Leu
>WENV183561674
OOBV01001756
480325
Bacteroidota
CTG
Gln
>WENV183561316
OOBV01000264
176192
Bacteroidota
TCT
Arg
>WENV183561456
OOBV01000650
69204
Bacteroidota
TGA
Ser
>WENV183561844
OOBV01005966
69204
Bacteroidota
TGA
Ser
>WENV183561074
OOBV01000007
280446
Bacteroidota
TTT
Lys
>WENV183561164
OOBV01000066
484496
Bacteroidota
TTG
Gln
>WENV183561901
OOBV01008508
484496
Bacteroidota
TTG
Gln
>WENV183561069
OOBV01000003
27502
Bacteroidota
GGA
Ser
>WENV183561102
OOBV01000010
27502
Bacteroidota
GGA
Ser
>WENV183561402
OOBV01000457
285750
Bacteroidota
CCC
Gly
>WENV183561066
OOBV01000002
365112
Bacteroidota
TTT
Lys
>WENV183561249
OOBV01000133
365112
Bacteroidota
TTT
Lys
>WENV183561289
OOBV01000201
365112
Bacteroidota
TTT
Lys
>WENV183561588
OOBV01001172
365112
Bacteroidota
TTT
Lys
>WENV183561677
OOBV01001759
365112
Bacteroidota
TTT
Lys
>WENV183561168
OOBV01000070
398836
Bacteroidota
GCA
Cys
>WENV183561223
OOBV01000107
398836
Bacteroidota
GCA
Cys
>WENV183561942
OOBV01010820
398836
Bacteroidota
GCA
Cys
>WENV183561535
OOBV01000933
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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