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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183563414
OOBX01000162
117741
Bacteroidota
TAG
Leu
>WENV183563182
OOBX01000024
398829
Bacteroidota
CCT
Arg
>WENV183563151
OOBX01000010
404226
Bacteroidota
CCT
Arg
>WENV183563099
OOBX01000005
280553
Bacteroidota
TTT
Lys
>WENV183563236
OOBX01000042
280557
Bacteroidota
CAT
Met
>WENV183563415
OOBX01000170
280557
Bacteroidota
CAT
Met
>WENV183563461
OOBX01000213
20206
Bacteroidota
GGA
Ser
>WENV183563169
OOBX01000017
201819
Bacteroidota
CAT
Met
>WENV183563129
OOBX01000008
56493
Bacteroidota
TGA
Ser
>WENV183563411
OOBX01000151
56493
Bacteroidota
TGA
Ser
>WENV183563130
OOBX01000008
175903
Bacteroidota
GTG
His
>WENV183563459
OOBX01000212
118089
Bacteroidota
TAG
Leu
>WENV183563696
OOBX01005929
398872
Bacteroidota
GGT
Thr
>WENV183563261
OOBX01000057
56072
Bacteroidota
TAA
Leu
>WENV183563268
OOBX01000062
57807
Bacteroidota
TGA
Ser
>WENV183563568
OOBX01000596
57807
Bacteroidota
TGA
Ser
>WENV183563102
OOBX01000005
175902
Bacteroidota
GGC
Ala
>WENV183563172
OOBX01000020
280451
Bacteroidota
CGT
Thr
>WENV183563250
OOBX01000052
99847
Bacteroidota
GTA
Tyr
>WENV183563572
OOBX01000609
99847
Bacteroidota
GTA
Tyr
>WENV183563621
OOBX01001121
99847
Bacteroidota
GTA
Tyr
>WENV183563460
OOBX01000213
488746
Bacteroidota
CTG
Gln
>WENV183563554
OOBX01000510
280478
Bacteroidota
GCC
Gly
>WENV183563358
OOBX01000125
175844
Bacteroidota
GGC
Ala
>WENV183563253
OOBX01000054
158068
Bacteroidota
GGG
Pro
>WENV183563465
OOBX01000225
158068
Bacteroidota
GGG
Pro
>WENV183563609
OOBX01000911
158068
Bacteroidota
GGG
Pro
>WENV183563242
OOBX01000049
398828
Bacteroidota
CCG
Arg
>WENV183563307
OOBX01000080
140771
Bacteroidota
>WENV183563762
OOBX01011471
400088
Bacteroidota
GGT
Thr
>WENV183563262
OOBX01000058
280446
Bacteroidota
TTT
Lys
>WENV183563326
OOBX01000103
280446
Bacteroidota
TTT
Lys
>WENV183563537
OOBX01000420
280446
Bacteroidota
TTT
Lys
>WENV183563556
OOBX01000538
280446
Bacteroidota
TTT
Lys
>WENV183563155
OOBX01000012
484496
Bacteroidota
TTG
Gln
>WENV183563186
OOBX01000028
484496
Bacteroidota
TTG
Gln
>WENV183563251
OOBX01000053
484496
Bacteroidota
TTG
Gln
>WENV183563635
OOBX01001633
285750
Bacteroidota
CCC
Gly
>WENV183563103
OOBX01000005
398836
Bacteroidota
GCA
Cys
>WENV183563421
OOBX01000176
398836
Bacteroidota
GCA
Cys
>WENV183563450
OOBX01000200
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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