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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183565350
OOBZ01005537
117741
Bacteroidota
TAG
Leu
>WENV183565824
OOBZ01033425
117741
Bacteroidota
TAG
Leu
>WENV183564653
OOBZ01000102
398829
Bacteroidota
CCT
Arg
>WENV183564678
OOBZ01000134
175904
Bacteroidota
CGG
Pro
>WENV183565593
OOBZ01012899
400161
Bacteroidota
GGT
Thr
>WENV183564743
OOBZ01000270
289031
Bacteroidota
CAT
Met
>WENV183564757
OOBZ01000284
289031
Bacteroidota
CAT
Met
>WENV183564934
OOBZ01000948
280557
Bacteroidota
CAT
Met
>WENV183565200
OOBZ01003100
280557
Bacteroidota
CAT
Met
>WENV183565629
OOBZ01014726
20206
Bacteroidota
GGA
Ser
>WENV183564654
OOBZ01000105
483416
Bacteroidota
CTG
Gln
>WENV183564745
OOBZ01000273
483416
Bacteroidota
CTG
Gln
>WENV183564820
OOBZ01000452
483416
Bacteroidota
CTG
Gln
>WENV183564821
OOBZ01000452
483416
Bacteroidota
CTG
Gln
>WENV183565982
OOBZ01068411
398871
Bacteroidota
TTC
Glu
>WENV183564739
OOBZ01000232
201819
Bacteroidota
CAT
Met
>WENV183565868
OOBZ01038478
118221
Bacteroidota
CAA
Leu
>WENV183565158
OOBZ01002477
56493
Bacteroidota
TGA
Ser
>WENV183565199
OOBZ01003100
56493
Bacteroidota
TGA
Ser
>WENV183565442
OOBZ01008267
175903
Bacteroidota
GTG
His
>WENV183565032
OOBZ01001461
351598
Bacteroidota
CGG
Pro
>WENV183565783
OOBZ01028271
291612
Bacteroidota
>WENV183565116
OOBZ01002096
118089
Bacteroidota
TAG
Leu
>WENV183565484
OOBZ01009119
398872
Bacteroidota
GGT
Thr
>WENV183564634
OOBZ01000071
178907
Bacteroidota
TCT
Arg
>WENV183564738
OOBZ01000231
405877
Bacteroidota
GGT
Thr
>WENV183565500
OOBZ01009918
56385
Bacteroidota
TGA
Ser
>WENV183565132
OOBZ01002199
182267
Bacteroidota
GTT
Asn
>WENV183565133
OOBZ01002199
182267
Bacteroidota
GTT
Asn
>WENV183564793
OOBZ01000349
20449
Bacteroidota
GGA
Ser
>WENV183565594
OOBZ01012899
312035
Bacteroidota
CCA
Trp
>WENV183565289
OOBZ01004572
242241
Bacteroidota
GTC
Asp
>WENV183565857
OOBZ01037046
242241
Bacteroidota
GTC
Asp
>WENV183564628
OOBZ01000052
56072
Bacteroidota
TAA
Leu
>WENV183565756
OOBZ01025582
175902
Bacteroidota
GGC
Ala
>WENV183564829
OOBZ01000481
174201
Bacteroidota
GGG
Pro
>WENV183565239
OOBZ01003657
174201
Bacteroidota
GGG
Pro
>WENV183564910
OOBZ01000822
280451
Bacteroidota
CGT
Thr
>WENV183564915
OOBZ01000844
418894
Bacteroidota
TTC
Glu
>WENV183564639
OOBZ01000090
99847
Bacteroidota
GTA
Tyr
>WENV183564657
OOBZ01000108
399200
Bacteroidota
CAT
Met
>WENV183565002
OOBZ01001248
399200
Bacteroidota
CAT
Met
>WENV183565250
OOBZ01003820
399200
Bacteroidota
CAT
Met
>WENV183564613
OOBZ01000042
186874
Bacteroidota
CAT
Met
>WENV183564866
OOBZ01000596
186874
Bacteroidota
CAT
Met
>WENV183565798
OOBZ01030741
186874
Bacteroidota
CAT
Met
>WENV183565647
OOBZ01015834
46648
Bacteroidota
TAA
Leu
>WENV183564722
OOBZ01000202
178179
Bacteroidota
GGC
Ala
>WENV183564825
OOBZ01000468
488746
Bacteroidota
CTG
Gln
>WENV183565145
OOBZ01002386
280478
Bacteroidota
GCC
Gly
>WENV183565147
OOBZ01002386
280478
Bacteroidota
GCC
Gly
>WENV183564885
OOBZ01000682
27524
Bacteroidota
GGA
Ser
>WENV183565542
OOBZ01011614
186108
Bacteroidota
GTT
Asn
>WENV183565234
OOBZ01003544
175844
Bacteroidota
GGC
Ala
>WENV183564744
OOBZ01000271
73011
Bacteroidota
CAA
Leu
>WENV183565897
OOBZ01044189
172187
Bacteroidota
TAC
Val
>WENV183564660
OOBZ01000112
183889
Bacteroidota
GGC
Ala
>WENV183565033
OOBZ01001478
183889
Bacteroidota
GGC
Ala
>WENV183564662
OOBZ01000115
398828
Bacteroidota
CCG
Arg
>WENV183565483
OOBZ01009056
74084
Bacteroidota
CAG
Leu
>WENV183565828
OOBZ01034270
176192
Bacteroidota
TCT
Arg
>WENV183565256
OOBZ01003919
176192
Bacteroidota
TCT
Arg
>WENV183565479
OOBZ01008941
481328
Bacteroidota
TTG
Gln
>WENV183565789
OOBZ01029121
400088
Bacteroidota
GGT
Thr
>WENV183565026
OOBZ01001449
69204
Bacteroidota
TGA
Ser
>WENV183565042
OOBZ01001532
280446
Bacteroidota
TTT
Lys
>WENV183564909
OOBZ01000819
484496
Bacteroidota
TTG
Gln
>WENV183565708
OOBZ01020694
27502
Bacteroidota
GGA
Ser
>WENV183566014
OOBZ01080555
27502
Bacteroidota
GGA
Ser
>WENV183565262
OOBZ01004080
285750
Bacteroidota
CCC
Gly
>WENV183565714
OOBZ01021426
373714
Bacteroidota
GCC
Gly
>WENV183564918
OOBZ01000848
416636
Bacteroidota
TTC
Glu
>WENV183564787
OOBZ01000344
365112
Bacteroidota
TTT
Lys
>WENV183564835
OOBZ01000508
365112
Bacteroidota
TTT
Lys
>WENV183565123
OOBZ01002154
365112
Bacteroidota
TTT
Lys
>WENV183564600
OOBZ01000025
398836
Bacteroidota
GCA
Cys
>WENV183564788
OOBZ01000346
398836
Bacteroidota
GCA
Cys
>WENV183564894
OOBZ01000716
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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