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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566055
OOCA01000008
285360
Bacteroidota
TTT
Lys
>WENV183566097
OOCA01000033
285360
Bacteroidota
TTT
Lys
>WENV183566167
OOCA01000108
117741
Bacteroidota
TAG
Leu
>WENV183566228
OOCA01000221
398829
Bacteroidota
CCT
Arg
>WENV183566284
OOCA01000424
398829
Bacteroidota
CCT
Arg
>WENV183566402
OOCA01001012
175838
Bacteroidota
GTT
Asn
>WENV183566403
OOCA01001012
175838
Bacteroidota
GTT
Asn
>WENV183566185
OOCA01000142
289031
Bacteroidota
CAT
Met
>WENV183566113
OOCA01000046
280557
Bacteroidota
CAT
Met
>WENV183566321
OOCA01000590
280557
Bacteroidota
CAT
Met
>WENV183566093
OOCA01000027
20206
Bacteroidota
GGA
Ser
>WENV183566313
OOCA01000510
483416
Bacteroidota
CTG
Gln
>WENV183566155
OOCA01000089
201819
Bacteroidota
CAT
Met
>WENV183566061
OOCA01000009
56493
Bacteroidota
TGA
Ser
>WENV183566078
OOCA01000017
175903
Bacteroidota
GTG
His
>WENV183566426
OOCA01001155
351598
Bacteroidota
CGG
Pro
>WENV183566438
OOCA01001321
351598
Bacteroidota
CGG
Pro
>WENV183566443
OOCA01001363
351598
Bacteroidota
CGG
Pro
>WENV183566635
OOCA01014262
175936
Bacteroidota
CAT
Met
>WENV183566191
OOCA01000156
405877
Bacteroidota
GGT
Thr
>WENV183566232
OOCA01000230
21127
Bacteroidota
GGA
Ser
>WENV183566103
OOCA01000039
56072
Bacteroidota
TAA
Leu
>WENV183566459
OOCA01001510
56072
Bacteroidota
TAA
Leu
>WENV183566573
OOCA01006193
56072
Bacteroidota
TAA
Leu
>WENV183566139
OOCA01000066
175902
Bacteroidota
GGC
Ala
>WENV183566057
OOCA01000008
398860
Bacteroidota
CTC
Glu
>WENV183566062
OOCA01000010
480404
Bacteroidota
TTG
Gln
>WENV183566094
OOCA01000027
174201
Bacteroidota
GGG
Pro
>WENV183566385
OOCA01000949
174201
Bacteroidota
GGG
Pro
>WENV183566417
OOCA01001128
280451
Bacteroidota
CGT
Thr
>WENV183566276
OOCA01000403
99847
Bacteroidota
GTA
Tyr
>WENV183566442
OOCA01001361
99847
Bacteroidota
GTA
Tyr
>WENV183566515
OOCA01003489
99847
Bacteroidota
GTA
Tyr
>WENV183566654
OOCA01018404
99847
Bacteroidota
GTA
Tyr
>WENV183566407
OOCA01001026
186874
Bacteroidota
CAT
Met
>WENV183566092
OOCA01000027
488746
Bacteroidota
CTG
Gln
>WENV183566137
OOCA01000065
27524
Bacteroidota
GGA
Ser
>WENV183566409
OOCA01001049
175844
Bacteroidota
GGC
Ala
>WENV183566444
OOCA01001375
175844
Bacteroidota
GGC
Ala
>WENV183566450
OOCA01001453
175844
Bacteroidota
GGC
Ala
>WENV183566247
OOCA01000263
398828
Bacteroidota
CCG
Arg
>WENV183566168
OOCA01000111
159415
Bacteroidota
TAC
Val
>WENV183566169
OOCA01000111
159415
Bacteroidota
TAC
Val
>WENV183566520
OOCA01003618
159415
Bacteroidota
TAC
Val
>WENV183566183
OOCA01000140
176192
Bacteroidota
TCT
Arg
>WENV183566367
OOCA01000863
176192
Bacteroidota
TCT
Arg
>WENV183566060
OOCA01000009
69204
Bacteroidota
TGA
Ser
>WENV183566077
OOCA01000017
69204
Bacteroidota
TGA
Ser
>WENV183566446
OOCA01001411
69204
Bacteroidota
TGA
Ser
>WENV183566499
OOCA01002872
69204
Bacteroidota
TGA
Ser
>WENV183566704
OOCA01028128
69204
Bacteroidota
TGA
Ser
>WENV183566095
OOCA01000027
280446
Bacteroidota
TTT
Lys
>WENV183566099
OOCA01000035
280446
Bacteroidota
TTT
Lys
>WENV183566121
OOCA01000050
484496
Bacteroidota
TTG
Gln
>WENV183566324
OOCA01000611
484496
Bacteroidota
TTG
Gln
>WENV183566473
OOCA01001832
27502
Bacteroidota
GGA
Ser
>WENV183566263
OOCA01000341
365112
Bacteroidota
TTT
Lys
>WENV183566347
OOCA01000721
365112
Bacteroidota
TTT
Lys
>WENV183566157
OOCA01000090
398836
Bacteroidota
GCA
Cys
>WENV183566307
OOCA01000473
398836
Bacteroidota
GCA
Cys
>WENV183566485
OOCA01002420
398836
Bacteroidota
GCA
Cys
>WENV183566101
OOCA01000036
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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