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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183571346
OOCE01001163
175838
Bacteroidota
GTT
Asn
>WENV183571347
OOCE01001163
175838
Bacteroidota
GTT
Asn
>WENV183571158
OOCE01000007
400161
Bacteroidota
GGT
Thr
>WENV183571776
OOCE01055614
289031
Bacteroidota
CAT
Met
>WENV183571203
OOCE01000079
156422
Bacteroidota
TAC
Val
>WENV183571204
OOCE01000079
156422
Bacteroidota
TAC
Val
>WENV183571205
OOCE01000079
156422
Bacteroidota
TAC
Val
>WENV183571206
OOCE01000079
156422
Bacteroidota
TAC
Val
>WENV183571522
OOCE01007030
280557
Bacteroidota
CAT
Met
>WENV183571523
OOCE01007030
280557
Bacteroidota
CAT
Met
>WENV183571524
OOCE01007030
280557
Bacteroidota
CAT
Met
>WENV183571552
OOCE01009351
20206
Bacteroidota
GGA
Ser
>WENV183571230
OOCE01000164
118221
Bacteroidota
CAA
Leu
>WENV183571374
OOCE01001560
156068
Bacteroidota
TAC
Val
>WENV183571213
OOCE01000091
56385
Bacteroidota
TGA
Ser
>WENV183571214
OOCE01000091
56385
Bacteroidota
TGA
Ser
>WENV183571380
OOCE01001609
182267
Bacteroidota
GTT
Asn
>WENV183571381
OOCE01001609
182267
Bacteroidota
GTT
Asn
>WENV183571159
OOCE01000007
312035
Bacteroidota
CCA
Trp
>WENV183571192
OOCE01000063
242241
Bacteroidota
GTC
Asp
>WENV183571193
OOCE01000063
242241
Bacteroidota
GTC
Asp
>WENV183571194
OOCE01000063
242241
Bacteroidota
GTC
Asp
>WENV183571195
OOCE01000063
242241
Bacteroidota
GTC
Asp
>WENV183571331
OOCE01001005
280451
Bacteroidota
CGT
Thr
>WENV183571513
OOCE01006240
99847
Bacteroidota
GTA
Tyr
>WENV183571294
OOCE01000693
404109
Bacteroidota
CTC
Glu
>WENV183571295
OOCE01000693
404109
Bacteroidota
CTC
Glu
>WENV183571296
OOCE01000693
404109
Bacteroidota
CTC
Glu
>WENV183571493
OOCE01005099
46648
Bacteroidota
TAA
Leu
>WENV183571437
OOCE01002480
398828
Bacteroidota
CCG
Arg
>WENV183571245
OOCE01000249
481328
Bacteroidota
TTG
Gln
>WENV183571368
OOCE01001452
69204
Bacteroidota
TGA
Ser
>WENV183571458
OOCE01003472
280446
Bacteroidota
TTT
Lys
>WENV183571777
OOCE01056319
280446
Bacteroidota
TTT
Lys
>WENV183571365
OOCE01001430
484496
Bacteroidota
TTG
Gln
>WENV183571391
OOCE01001776
27502
Bacteroidota
GGA
Ser
>WENV183571289
OOCE01000660
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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