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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183576472
OOCJ01000105
172207
Bacteroidota
GGG
Pro
>WENV183576845
OOCJ01001874
172207
Bacteroidota
GGG
Pro
>WENV183576976
OOCJ01003860
172207
Bacteroidota
GGG
Pro
>WENV183577266
OOCJ01041241
172207
Bacteroidota
GGG
Pro
>WENV183576736
OOCJ01000919
117741
Bacteroidota
TAG
Leu
>WENV183576394
OOCJ01000030
175838
Bacteroidota
GTT
Asn
>WENV183576772
OOCJ01001144
175838
Bacteroidota
GTT
Asn
>WENV183576726
OOCJ01000819
404226
Bacteroidota
CCT
Arg
>WENV183577176
OOCJ01020698
175904
Bacteroidota
CGG
Pro
>WENV183576632
OOCJ01000402
289031
Bacteroidota
CAT
Met
>WENV183576444
OOCJ01000077
280557
Bacteroidota
CAT
Met
>WENV183576445
OOCJ01000077
280557
Bacteroidota
CAT
Met
>WENV183576501
OOCJ01000146
280557
Bacteroidota
CAT
Met
>WENV183576816
OOCJ01001547
280557
Bacteroidota
CAT
Met
>WENV183576840
OOCJ01001680
280557
Bacteroidota
CAT
Met
>WENV183576616
OOCJ01000362
20206
Bacteroidota
GGA
Ser
>WENV183576478
OOCJ01000112
483416
Bacteroidota
CTG
Gln
>WENV183576625
OOCJ01000388
398871
Bacteroidota
TTC
Glu
>WENV183576405
OOCJ01000040
56493
Bacteroidota
TGA
Ser
>WENV183576494
OOCJ01000133
56493
Bacteroidota
TGA
Ser
>WENV183576634
OOCJ01000405
56493
Bacteroidota
TGA
Ser
>WENV183576805
OOCJ01001439
56493
Bacteroidota
TGA
Ser
>WENV183576799
OOCJ01001370
175906
Bacteroidota
GTG
His
>WENV183576638
OOCJ01000441
175903
Bacteroidota
GTG
His
>WENV183576460
OOCJ01000088
351598
Bacteroidota
CGG
Pro
>WENV183576491
OOCJ01000124
351598
Bacteroidota
CGG
Pro
>WENV183576704
OOCJ01000698
156068
Bacteroidota
TAC
Val
>WENV183576737
OOCJ01000924
118089
Bacteroidota
TAG
Leu
>WENV183576732
OOCJ01000880
178907
Bacteroidota
TCT
Arg
>WENV183577082
OOCJ01009324
172085
Bacteroidota
TAC
Val
>WENV183576687
OOCJ01000633
29791
Bacteroidota
GCT
Ser
>WENV183576342
OOCJ01000004
182267
Bacteroidota
GTT
Asn
>WENV183576343
OOCJ01000004
182267
Bacteroidota
GTT
Asn
>WENV183576997
OOCJ01004924
20449
Bacteroidota
GGA
Ser
>WENV183577057
OOCJ01007562
178133
Bacteroidota
GAT
Ile
>WENV183577167
OOCJ01019254
21127
Bacteroidota
GGA
Ser
>WENV183576376
OOCJ01000017
56072
Bacteroidota
TAA
Leu
>WENV183576393
OOCJ01000030
56072
Bacteroidota
TAA
Leu
>WENV183576537
OOCJ01000201
56072
Bacteroidota
TAA
Leu
>WENV183576817
OOCJ01001551
56072
Bacteroidota
TAA
Leu
>WENV183577276
OOCJ01044084
175886
Bacteroidota
GGC
Ala
>WENV183576744
OOCJ01000959
175902
Bacteroidota
GGC
Ala
>WENV183577282
OOCJ01045432
179697
Bacteroidota
TGT
Thr
>WENV183577140
OOCJ01013982
480404
Bacteroidota
TTG
Gln
>WENV183576465
OOCJ01000093
280451
Bacteroidota
CGT
Thr
>WENV183576989
OOCJ01004354
418894
Bacteroidota
TTC
Glu
>WENV183576369
OOCJ01000014
99847
Bacteroidota
GTA
Tyr
>WENV183576590
OOCJ01000308
99847
Bacteroidota
GTA
Tyr
>WENV183576771
OOCJ01001144
99847
Bacteroidota
GTA
Tyr
>WENV183576886
OOCJ01002099
399200
Bacteroidota
CAT
Met
>WENV183576676
OOCJ01000590
186874
Bacteroidota
CAT
Met
>WENV183576692
OOCJ01000653
178179
Bacteroidota
GGC
Ala
>WENV183576458
OOCJ01000087
488746
Bacteroidota
CTG
Gln
>WENV183576619
OOCJ01000372
488746
Bacteroidota
CTG
Gln
>WENV183576587
OOCJ01000305
280478
Bacteroidota
GCC
Gly
>WENV183576459
OOCJ01000087
27524
Bacteroidota
GGA
Ser
>WENV183576668
OOCJ01000546
187400
Bacteroidota
GTT
Asn
>WENV183576669
OOCJ01000546
187400
Bacteroidota
GTT
Asn
>WENV183576670
OOCJ01000546
187400
Bacteroidota
GTT
Asn
>WENV183576671
OOCJ01000546
187400
Bacteroidota
GTT
Asn
>WENV183576888
OOCJ01002157
73011
Bacteroidota
CAA
Leu
>WENV183577065
OOCJ01008104
280515
Bacteroidota
CCA
Trp
>WENV183576464
OOCJ01000091
398828
Bacteroidota
CCG
Arg
>WENV183576611
OOCJ01000357
398828
Bacteroidota
CCG
Arg
>WENV183576727
OOCJ01000822
74084
Bacteroidota
CAG
Leu
>WENV183577103
OOCJ01011345
480325
Bacteroidota
CTG
Gln
>WENV183577265
OOCJ01040592
176192
Bacteroidota
TCT
Arg
>WENV183577121
OOCJ01012834
400088
Bacteroidota
GGT
Thr
>WENV183576580
OOCJ01000291
69204
Bacteroidota
TGA
Ser
>WENV183576747
OOCJ01000991
69204
Bacteroidota
TGA
Ser
>WENV183576555
OOCJ01000244
280446
Bacteroidota
TTT
Lys
>WENV183576575
OOCJ01000278
280446
Bacteroidota
TTT
Lys
>WENV183576796
OOCJ01001363
280446
Bacteroidota
TTT
Lys
>WENV183576618
OOCJ01000367
484496
Bacteroidota
TTG
Gln
>WENV183576694
OOCJ01000661
484496
Bacteroidota
TTG
Gln
>WENV183576387
OOCJ01000023
27502
Bacteroidota
GGA
Ser
>WENV183576529
OOCJ01000188
27502
Bacteroidota
GGA
Ser
>WENV183576706
OOCJ01000705
27502
Bacteroidota
GGA
Ser
>WENV183576961
OOCJ01003606
285750
Bacteroidota
CCC
Gly
>WENV183577098
OOCJ01010752
373714
Bacteroidota
GCC
Gly
>WENV183576422
OOCJ01000052
365112
Bacteroidota
TTT
Lys
>WENV183576473
OOCJ01000105
365112
Bacteroidota
TTT
Lys
>WENV183576517
OOCJ01000170
365112
Bacteroidota
TTT
Lys
>WENV183576600
OOCJ01000326
365112
Bacteroidota
TTT
Lys
>WENV183576637
OOCJ01000431
365112
Bacteroidota
TTT
Lys
>WENV183576496
OOCJ01000139
398836
Bacteroidota
GCA
Cys
>WENV183576738
OOCJ01000946
398836
Bacteroidota
GCA
Cys
>WENV183576901
OOCJ01002424
398836
Bacteroidota
GCA
Cys
>WENV183576699
OOCJ01000686
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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