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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183577356
OOCK01000045
146800
Bacteroidota
>WENV183577872
OOCK01007312
113604
Bacteroidota
>WENV183577619
OOCK01000876
95987
Bacteroidota
CAA
Leu
>WENV183577637
OOCK01000990
97336
Bacteroidota
CAG
Leu
>WENV183577382
OOCK01000079
243025
Bacteroidota
CAT
Met
>WENV183577640
OOCK01000999
193809
Bacteroidota
CAT
Met
>WENV183577786
OOCK01002692
235207
Bacteroidota
CAT
Met
>WENV183577785
OOCK01002692
235207
Bacteroidota
CAT
Met
>WENV183577853
OOCK01005250
235207
Bacteroidota
CAT
Met
>WENV183578029
OOCK01033178
154643
Bacteroidota
CAT
Met
>WENV183577482
OOCK01000283
154643
Bacteroidota
CAT
Met
>WENV183577804
OOCK01003184
237797
Bacteroidota
CCA
Trp
>WENV183577930
OOCK01013289
338124
Bacteroidota
CCG
Arg
>WENV183577454
OOCK01000229
343138
Bacteroidota
CCT
Arg
>WENV183577702
OOCK01001655
338125
Bacteroidota
CCT
Arg
>WENV183577649
OOCK01001132
338125
Bacteroidota
CCT
Arg
>WENV183577722
OOCK01001915
301449
Bacteroidota
CGG
Pro
>WENV183577650
OOCK01001133
301449
Bacteroidota
CGG
Pro
>WENV183577330
OOCK01000021
301449
Bacteroidota
CGG
Pro
>WENV183577896
OOCK01009690
235102
Bacteroidota
CGT
Thr
>WENV183577344
OOCK01000031
237796
Bacteroidota
CGT
Thr
>WENV183577841
OOCK01004485
394247
Bacteroidota
CTC
Glu
>WENV183577840
OOCK01004485
394247
Bacteroidota
CTC
Glu
>WENV183577412
OOCK01000128
394247
Bacteroidota
CTC
Glu
>WENV183577410
OOCK01000128
394247
Bacteroidota
CTC
Glu
>WENV183577409
OOCK01000128
394247
Bacteroidota
CTC
Glu
>WENV183577408
OOCK01000128
394247
Bacteroidota
CTC
Glu
>WENV183577755
OOCK01002190
344769
Bacteroidota
CTC
Glu
>WENV183577754
OOCK01002190
344769
Bacteroidota
CTC
Glu
>WENV183577659
OOCK01001234
413663
Bacteroidota
CTG
Gln
>WENV183577642
OOCK01001017
413663
Bacteroidota
CTG
Gln
>WENV183577498
OOCK01000300
413663
Bacteroidota
CTG
Gln
>WENV183577497
OOCK01000300
413663
Bacteroidota
CTG
Gln
>WENV183577401
OOCK01000112
425638
Bacteroidota
CTG
Gln
>WENV183577385
OOCK01000083
425638
Bacteroidota
CTG
Gln
>WENV183577315
OOCK01000014
414426
Bacteroidota
CTG
Gln
>WENV183577795
OOCK01003053
313363
Bacteroidota
GAA
Phe
>WENV183577457
OOCK01000234
313363
Bacteroidota
GAA
Phe
>WENV183577419
OOCK01000150
313363
Bacteroidota
GAA
Phe
>WENV183577417
OOCK01000148
313363
Bacteroidota
GAA
Phe
>WENV183577363
OOCK01000058
59498
Bacteroidota
GAG
Leu
>WENV183577961
OOCK01017425
146761
Bacteroidota
GAT
Ile
>WENV183577953
OOCK01016203
338132
Bacteroidota
GCA
Cys
>WENV183577813
OOCK01003701
338132
Bacteroidota
GCA
Cys
>WENV183577724
OOCK01001919
338132
Bacteroidota
GCA
Cys
>WENV183577624
OOCK01000897
338132
Bacteroidota
GCA
Cys
>WENV183578018
OOCK01030455
235129
Bacteroidota
GCC
Gly
>WENV183577606
OOCK01000811
19528
Bacteroidota
GGA
Ser
>WENV183578032
OOCK01035402
16224
Bacteroidota
GGA
Ser
>WENV183577855
OOCK01005567
144655
Bacteroidota
GGC
Ala
>WENV183577708
OOCK01001704
144655
Bacteroidota
GGC
Ala
>WENV183577473
OOCK01000257
126965
Bacteroidota
GGG
Pro
>WENV183577797
OOCK01003098
141414
Bacteroidota
GGG
Pro
>WENV183577765
OOCK01002381
141414
Bacteroidota
GGG
Pro
>WENV183577762
OOCK01002328
141414
Bacteroidota
GGG
Pro
>WENV183577647
OOCK01001115
141414
Bacteroidota
GGG
Pro
>WENV183577350
OOCK01000039
141414
Bacteroidota
GGG
Pro
>WENV183577803
OOCK01003184
339412
Bacteroidota
GGT
Thr
>WENV183577974
OOCK01019864
344692
Bacteroidota
GGT
Thr
>WENV183577633
OOCK01000937
80607
Bacteroidota
GTA
Tyr
>WENV183577598
OOCK01000756
80607
Bacteroidota
GTA
Tyr
>WENV183577462
OOCK01000240
80607
Bacteroidota
GTA
Tyr
>WENV183577742
OOCK01002124
196394
Bacteroidota
GTC
Asp
>WENV183577496
OOCK01000298
196394
Bacteroidota
GTC
Asp
>WENV183577495
OOCK01000298
196394
Bacteroidota
GTC
Asp
>WENV183577494
OOCK01000298
196394
Bacteroidota
GTC
Asp
>WENV183577657
OOCK01001205
147147
Bacteroidota
GTG
His
>WENV183577599
OOCK01000760
147147
Bacteroidota
GTG
His
>WENV183577479
OOCK01000273
147147
Bacteroidota
GTG
His
>WENV183577478
OOCK01000273
147147
Bacteroidota
GTG
His
>WENV183577932
OOCK01013501
168744
Bacteroidota
GTG
His
>WENV183577614
OOCK01000857
144656
Bacteroidota
GTG
His
>WENV183577404
OOCK01000123
144656
Bacteroidota
GTG
His
>WENV183577501
OOCK01000301
155123
Bacteroidota
GTT
Asn
>WENV183577500
OOCK01000301
155123
Bacteroidota
GTT
Asn
>WENV183577994
OOCK01022754
144590
Bacteroidota
GTT
Asn
>WENV183577850
OOCK01004893
150485
Bacteroidota
GTT
Asn
>WENV183577720
OOCK01001885
150485
Bacteroidota
GTT
Asn
>WENV183577469
OOCK01000251
150485
Bacteroidota
GTT
Asn
>WENV183577565
OOCK01000553
37076
Bacteroidota
TAA
Leu
>WENV183577550
OOCK01000480
37076
Bacteroidota
TAA
Leu
>WENV183577536
OOCK01000413
37076
Bacteroidota
TAA
Leu
>WENV183577854
OOCK01005393
44852
Bacteroidota
TAA
Leu
>WENV183577758
OOCK01002214
44852
Bacteroidota
TAA
Leu
>WENV183577623
OOCK01000888
44852
Bacteroidota
TAA
Leu
>WENV183577431
OOCK01000165
141635
Bacteroidota
TAC
Val
>WENV183577466
OOCK01000244
126966
Bacteroidota
TAC
Val
>WENV183577465
OOCK01000244
126966
Bacteroidota
TAC
Val
>WENV183577593
OOCK01000710
136244
Bacteroidota
TAC
Val
>WENV183577545
OOCK01000470
136244
Bacteroidota
TAC
Val
>WENV183577898
OOCK01009743
95559
Bacteroidota
TAG
Leu
>WENV183577783
OOCK01002636
95559
Bacteroidota
TAG
Leu
>WENV183577960
OOCK01017183
56823
Bacteroidota
TGA
Ser
>WENV183577838
OOCK01004471
56823
Bacteroidota
TGA
Ser
>WENV183577831
OOCK01004304
56823
Bacteroidota
TGA
Ser
>WENV183577793
OOCK01002938
56823
Bacteroidota
TGA
Ser
>WENV183577781
OOCK01002621
56823
Bacteroidota
TGA
Ser
>WENV183577761
OOCK01002292
56823
Bacteroidota
TGA
Ser
>WENV183577668
OOCK01001287
56823
Bacteroidota
TGA
Ser
>WENV183577574
OOCK01000575
56823
Bacteroidota
TGA
Ser
>WENV183577533
OOCK01000403
56823
Bacteroidota
TGA
Ser
>WENV183577519
OOCK01000357
56823
Bacteroidota
TGA
Ser
>WENV183577474
OOCK01000258
56823
Bacteroidota
TGA
Ser
>WENV183577370
OOCK01000062
353927
Bacteroidota
TTC
Glu
>WENV183577886
OOCK01008431
436206
Bacteroidota
TTG
Gln
>WENV183577621
OOCK01000884
436206
Bacteroidota
TTG
Gln
>WENV183577735
OOCK01002036
412479
Bacteroidota
TTG
Gln
>WENV183577521
OOCK01000363
415558
Bacteroidota
TTG
Gln
>WENV183577491
OOCK01000290
235097
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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