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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183577350
OOCK01000039
172207
Bacteroidota
GGG
Pro
>WENV183577647
OOCK01001115
172207
Bacteroidota
GGG
Pro
>WENV183577762
OOCK01002328
172207
Bacteroidota
GGG
Pro
>WENV183577765
OOCK01002381
172207
Bacteroidota
GGG
Pro
>WENV183577797
OOCK01003098
172207
Bacteroidota
GGG
Pro
>WENV183577783
OOCK01002636
117741
Bacteroidota
TAG
Leu
>WENV183577898
OOCK01009743
117741
Bacteroidota
TAG
Leu
>WENV183577702
OOCK01001655
398829
Bacteroidota
CCT
Arg
>WENV183577994
OOCK01022754
175838
Bacteroidota
GTT
Asn
>WENV183577454
OOCK01000229
404226
Bacteroidota
CCT
Arg
>WENV183577803
OOCK01003184
400161
Bacteroidota
GGT
Thr
>WENV183577382
OOCK01000079
289031
Bacteroidota
CAT
Met
>WENV183577545
OOCK01000470
156422
Bacteroidota
TAC
Val
>WENV183577593
OOCK01000710
156422
Bacteroidota
TAC
Val
>WENV183577785
OOCK01002692
280557
Bacteroidota
CAT
Met
>WENV183577786
OOCK01002692
280557
Bacteroidota
CAT
Met
>WENV183577853
OOCK01005250
280557
Bacteroidota
CAT
Met
>WENV183577315
OOCK01000014
483416
Bacteroidota
CTG
Gln
>WENV183577640
OOCK01000999
201819
Bacteroidota
CAT
Met
>WENV183577619
OOCK01000876
118221
Bacteroidota
CAA
Leu
>WENV183577519
OOCK01000357
56493
Bacteroidota
TGA
Ser
>WENV183577668
OOCK01001287
56493
Bacteroidota
TGA
Ser
>WENV183577781
OOCK01002621
56493
Bacteroidota
TGA
Ser
>WENV183577793
OOCK01002938
56493
Bacteroidota
TGA
Ser
>WENV183577960
OOCK01017183
56493
Bacteroidota
TGA
Ser
>WENV183577614
OOCK01000857
175903
Bacteroidota
GTG
His
>WENV183577404
OOCK01000123
175903
Bacteroidota
GTG
His
>WENV183577330
OOCK01000021
351598
Bacteroidota
CGG
Pro
>WENV183577650
OOCK01001133
351598
Bacteroidota
CGG
Pro
>WENV183577722
OOCK01001915
351598
Bacteroidota
CGG
Pro
>WENV183577465
OOCK01000244
156068
Bacteroidota
TAC
Val
>WENV183577466
OOCK01000244
156068
Bacteroidota
TAC
Val
>WENV183577431
OOCK01000165
172085
Bacteroidota
TAC
Val
>WENV183577974
OOCK01019864
405877
Bacteroidota
GGT
Thr
>WENV183577420
OOCK01000150
56385
Bacteroidota
TGA
Ser
>WENV183577458
OOCK01000234
56385
Bacteroidota
TGA
Ser
>WENV183577459
OOCK01000234
56385
Bacteroidota
TGA
Ser
>WENV183577469
OOCK01000251
182267
Bacteroidota
GTT
Asn
>WENV183577720
OOCK01001885
182267
Bacteroidota
GTT
Asn
>WENV183577850
OOCK01004893
182267
Bacteroidota
GTT
Asn
>WENV183577804
OOCK01003184
312035
Bacteroidota
CCA
Trp
>WENV183577961
OOCK01017425
178133
Bacteroidota
GAT
Ile
>WENV183577494
OOCK01000298
242241
Bacteroidota
GTC
Asp
>WENV183577495
OOCK01000298
242241
Bacteroidota
GTC
Asp
>WENV183577496
OOCK01000298
242241
Bacteroidota
GTC
Asp
>WENV183577742
OOCK01002124
242241
Bacteroidota
GTC
Asp
>WENV183577623
OOCK01000888
56072
Bacteroidota
TAA
Leu
>WENV183577758
OOCK01002214
56072
Bacteroidota
TAA
Leu
>WENV183577854
OOCK01005393
56072
Bacteroidota
TAA
Leu
>WENV183577708
OOCK01001704
175902
Bacteroidota
GGC
Ala
>WENV183577855
OOCK01005567
175902
Bacteroidota
GGC
Ala
>WENV183577896
OOCK01009690
280451
Bacteroidota
CGT
Thr
>WENV183577462
OOCK01000240
99847
Bacteroidota
GTA
Tyr
>WENV183577598
OOCK01000756
99847
Bacteroidota
GTA
Tyr
>WENV183577633
OOCK01000937
99847
Bacteroidota
GTA
Tyr
>WENV183577408
OOCK01000128
404109
Bacteroidota
CTC
Glu
>WENV183577409
OOCK01000128
404109
Bacteroidota
CTC
Glu
>WENV183577410
OOCK01000128
404109
Bacteroidota
CTC
Glu
>WENV183577412
OOCK01000128
404109
Bacteroidota
CTC
Glu
>WENV183577754
OOCK01002190
404109
Bacteroidota
CTC
Glu
>WENV183577755
OOCK01002190
404109
Bacteroidota
CTC
Glu
>WENV183577840
OOCK01004485
404109
Bacteroidota
CTC
Glu
>WENV183577841
OOCK01004485
404109
Bacteroidota
CTC
Glu
>WENV183577482
OOCK01000283
186874
Bacteroidota
CAT
Met
>WENV183578029
OOCK01033178
186874
Bacteroidota
CAT
Met
>WENV183577536
OOCK01000413
46648
Bacteroidota
TAA
Leu
>WENV183577550
OOCK01000480
46648
Bacteroidota
TAA
Leu
>WENV183577565
OOCK01000553
46648
Bacteroidota
TAA
Leu
>WENV183577356
OOCK01000045
178179
Bacteroidota
GGC
Ala
>WENV183577823
OOCK01003962
488746
Bacteroidota
CTG
Gln
>WENV183577602
OOCK01000775
118432
Bacteroidota
CAG
Leu
>WENV183578018
OOCK01030455
280478
Bacteroidota
GCC
Gly
>WENV183577500
OOCK01000301
187400
Bacteroidota
GTT
Asn
>WENV183577501
OOCK01000301
187400
Bacteroidota
GTT
Asn
>WENV183577930
OOCK01013289
398828
Bacteroidota
CCG
Arg
>WENV183577361
OOCK01000053
191205
Bacteroidota
TGG
Pro
>WENV183577362
OOCK01000053
191205
Bacteroidota
TGG
Pro
>WENV183577872
OOCK01007312
140771
Bacteroidota
>WENV183577735
OOCK01002036
481328
Bacteroidota
TTG
Gln
>WENV183577521
OOCK01000363
491385
Bacteroidota
TTG
Gln
>WENV183577474
OOCK01000258
69204
Bacteroidota
TGA
Ser
>WENV183577533
OOCK01000403
69204
Bacteroidota
TGA
Ser
>WENV183577574
OOCK01000575
69204
Bacteroidota
TGA
Ser
>WENV183577761
OOCK01002292
69204
Bacteroidota
TGA
Ser
>WENV183577831
OOCK01004304
69204
Bacteroidota
TGA
Ser
>WENV183577838
OOCK01004471
69204
Bacteroidota
TGA
Ser
>WENV183577491
OOCK01000290
280446
Bacteroidota
TTT
Lys
>WENV183577621
OOCK01000884
484496
Bacteroidota
TTG
Gln
>WENV183577886
OOCK01008431
484496
Bacteroidota
TTG
Gln
>WENV183578032
OOCK01035402
27502
Bacteroidota
GGA
Ser
>WENV183577398
OOCK01000106
365112
Bacteroidota
TTT
Lys
>WENV183577534
OOCK01000408
365112
Bacteroidota
TTT
Lys
>WENV183577568
OOCK01000562
365112
Bacteroidota
TTT
Lys
>WENV183577630
OOCK01000927
365112
Bacteroidota
TTT
Lys
>WENV183577651
OOCK01001134
365112
Bacteroidota
TTT
Lys
>WENV183577733
OOCK01002008
365112
Bacteroidota
TTT
Lys
>WENV183577624
OOCK01000897
398836
Bacteroidota
GCA
Cys
>WENV183577724
OOCK01001919
398836
Bacteroidota
GCA
Cys
>WENV183577813
OOCK01003701
398836
Bacteroidota
GCA
Cys
>WENV183577953
OOCK01016203
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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