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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183582444
OOCP01001938
285360
Bacteroidota
TTT
Lys
>WENV183582912
OOCP01006351
117741
Bacteroidota
TAG
Leu
>WENV183583308
OOCP01019363
117741
Bacteroidota
TAG
Leu
>WENV183582780
OOCP01004743
398829
Bacteroidota
CCT
Arg
>WENV183583197
OOCP01013893
398829
Bacteroidota
CCT
Arg
>WENV183582892
OOCP01005972
175838
Bacteroidota
GTT
Asn
>WENV183582034
OOCP01000554
404226
Bacteroidota
CCT
Arg
>WENV183582775
OOCP01004687
175904
Bacteroidota
CGG
Pro
>WENV183582001
OOCP01000500
280553
Bacteroidota
TTT
Lys
>WENV183581727
OOCP01000124
280557
Bacteroidota
CAT
Met
>WENV183581843
OOCP01000267
280557
Bacteroidota
CAT
Met
>WENV183581886
OOCP01000321
280557
Bacteroidota
CAT
Met
>WENV183582484
OOCP01002108
280557
Bacteroidota
CAT
Met
>WENV183583077
OOCP01010359
280557
Bacteroidota
CAT
Met
>WENV183583301
OOCP01018909
280557
Bacteroidota
CAT
Met
>WENV183581768
OOCP01000173
20492
Bacteroidota
GGA
Ser
>WENV183583015
OOCP01008327
20206
Bacteroidota
GGA
Ser
>WENV183582035
OOCP01000554
398871
Bacteroidota
TTC
Glu
>WENV183582036
OOCP01000554
398871
Bacteroidota
TTC
Glu
>WENV183582842
OOCP01005444
201819
Bacteroidota
CAT
Met
>WENV183582124
OOCP01000740
56493
Bacteroidota
TGA
Ser
>WENV183582922
OOCP01006486
56493
Bacteroidota
TGA
Ser
>WENV183583282
OOCP01017659
56493
Bacteroidota
TGA
Ser
>WENV183581827
OOCP01000253
175906
Bacteroidota
GTG
His
>WENV183581541
OOCP01000001
175903
Bacteroidota
GTG
His
>WENV183583205
OOCP01014460
175903
Bacteroidota
GTG
His
>WENV183583514
OOCP01043537
175903
Bacteroidota
GTG
His
>WENV183583515
OOCP01043580
175903
Bacteroidota
GTG
His
>WENV183581984
OOCP01000466
351598
Bacteroidota
CGG
Pro
>WENV183583066
OOCP01010028
351598
Bacteroidota
CGG
Pro
>WENV183583296
OOCP01018475
351598
Bacteroidota
CGG
Pro
>WENV183582232
OOCP01001028
291612
Bacteroidota
>WENV183582499
OOCP01002190
291612
Bacteroidota
>WENV183581550
OOCP01000005
156068
Bacteroidota
TAC
Val
>WENV183581859
OOCP01000296
118089
Bacteroidota
TAG
Leu
>WENV183582350
OOCP01001425
118089
Bacteroidota
TAG
Leu
>WENV183582011
OOCP01000515
280530
Bacteroidota
CCA
Trp
>WENV183581636
OOCP01000043
203954
Bacteroidota
GTC
Asp
>WENV183581728
OOCP01000126
203954
Bacteroidota
GTC
Asp
>WENV183582087
OOCP01000662
178907
Bacteroidota
TCT
Arg
>WENV183582156
OOCP01000830
29791
Bacteroidota
GCT
Ser
>WENV183582125
OOCP01000744
182267
Bacteroidota
GTT
Asn
>WENV183582646
OOCP01003396
182267
Bacteroidota
GTT
Asn
>WENV183583058
OOCP01009470
182267
Bacteroidota
GTT
Asn
>WENV183581688
OOCP01000091
20449
Bacteroidota
GGA
Ser
>WENV183581850
OOCP01000284
20449
Bacteroidota
GGA
Ser
>WENV183581538
OOCP01000001
178133
Bacteroidota
GAT
Ile
>WENV183583373
OOCP01023148
242241
Bacteroidota
GTC
Asp
>WENV183581967
OOCP01000440
56072
Bacteroidota
TAA
Leu
>WENV183582047
OOCP01000575
56072
Bacteroidota
TAA
Leu
>WENV183581885
OOCP01000319
56072
Bacteroidota
TAA
Leu
>WENV183581927
OOCP01000380
56072
Bacteroidota
TAA
Leu
>WENV183582680
OOCP01003695
175902
Bacteroidota
GGC
Ala
>WENV183582157
OOCP01000830
398860
Bacteroidota
CTC
Glu
>WENV183583268
OOCP01016950
398860
Bacteroidota
CTC
Glu
>WENV183581825
OOCP01000251
174201
Bacteroidota
GGG
Pro
>WENV183581893
OOCP01000329
174201
Bacteroidota
GGG
Pro
>WENV183582581
OOCP01002849
174201
Bacteroidota
GGG
Pro
>WENV183582703
OOCP01003991
174201
Bacteroidota
GGG
Pro
>WENV183583041
OOCP01008870
174201
Bacteroidota
GGG
Pro
>WENV183582331
OOCP01001386
280451
Bacteroidota
CGT
Thr
>WENV183583306
OOCP01019208
280451
Bacteroidota
CGT
Thr
>WENV183581637
OOCP01000044
99847
Bacteroidota
GTA
Tyr
>WENV183582406
OOCP01001729
99847
Bacteroidota
GTA
Tyr
>WENV183582497
OOCP01002181
99847
Bacteroidota
GTA
Tyr
>WENV183581599
OOCP01000022
399200
Bacteroidota
CAT
Met
>WENV183581600
OOCP01000022
399200
Bacteroidota
CAT
Met
>WENV183582059
OOCP01000609
399200
Bacteroidota
CAT
Met
>WENV183582217
OOCP01000982
399200
Bacteroidota
CAT
Met
>WENV183581898
OOCP01000335
488746
Bacteroidota
CTG
Gln
>WENV183582765
OOCP01004582
488746
Bacteroidota
CTG
Gln
>WENV183581569
OOCP01000011
280478
Bacteroidota
GCC
Gly
>WENV183581695
OOCP01000094
280478
Bacteroidota
GCC
Gly
>WENV183582113
OOCP01000717
280478
Bacteroidota
GCC
Gly
>WENV183582647
OOCP01003397
280478
Bacteroidota
GCC
Gly
>WENV183581899
OOCP01000335
27524
Bacteroidota
GGA
Ser
>WENV183583010
OOCP01008262
186108
Bacteroidota
GTT
Asn
>WENV183581625
OOCP01000037
187400
Bacteroidota
GTT
Asn
>WENV183581945
OOCP01000412
175844
Bacteroidota
GGC
Ala
>WENV183581812
OOCP01000238
73011
Bacteroidota
CAA
Leu
>WENV183581647
OOCP01000050
398828
Bacteroidota
CCG
Arg
>WENV183583407
OOCP01025793
398828
Bacteroidota
CCG
Arg
>WENV183581696
OOCP01000094
74084
Bacteroidota
CAG
Leu
>WENV183583336
OOCP01020943
159415
Bacteroidota
TAC
Val
>WENV183581699
OOCP01000098
480325
Bacteroidota
CTG
Gln
>WENV183581700
OOCP01000098
480325
Bacteroidota
CTG
Gln
>WENV183582383
OOCP01001567
140771
Bacteroidota
>WENV183581652
OOCP01000058
176192
Bacteroidota
TCT
Arg
>WENV183582213
OOCP01000947
176192
Bacteroidota
TCT
Arg
>WENV183582340
OOCP01001400
176192
Bacteroidota
TCT
Arg
>WENV183583023
OOCP01008422
176192
Bacteroidota
TCT
Arg
>WENV183583349
OOCP01021443
481328
Bacteroidota
TTG
Gln
>WENV183582015
OOCP01000520
69204
Bacteroidota
TGA
Ser
>WENV183583466
OOCP01032737
280446
Bacteroidota
TTT
Lys
>WENV183581852
OOCP01000285
280446
Bacteroidota
TTT
Lys
>WENV183581938
OOCP01000404
280446
Bacteroidota
TTT
Lys
>WENV183582505
OOCP01002250
280446
Bacteroidota
TTT
Lys
>WENV183583042
OOCP01008927
280446
Bacteroidota
TTT
Lys
>WENV183583126
OOCP01011190
280446
Bacteroidota
TTT
Lys
>WENV183582259
OOCP01001122
484496
Bacteroidota
TTG
Gln
>WENV183582261
OOCP01001125
484496
Bacteroidota
TTG
Gln
>WENV183582432
OOCP01001879
484496
Bacteroidota
TTG
Gln
>WENV183583520
OOCP01044457
27502
Bacteroidota
GGA
Ser
>WENV183582026
OOCP01000548
27502
Bacteroidota
GGA
Ser
>WENV183581601
OOCP01000022
285750
Bacteroidota
CCC
Gly
>WENV183582559
OOCP01002673
285750
Bacteroidota
CCC
Gly
>WENV183582161
OOCP01000835
188555
Bacteroidota
CAT
Met
>WENV183581846
OOCP01000270
365112
Bacteroidota
TTT
Lys
>WENV183582662
OOCP01003517
365112
Bacteroidota
TTT
Lys
>WENV183582909
OOCP01006333
365112
Bacteroidota
TTT
Lys
>WENV183581779
OOCP01000188
398836
Bacteroidota
GCA
Cys
>WENV183581845
OOCP01000268
398836
Bacteroidota
GCA
Cys
>WENV183581991
OOCP01000473
398836
Bacteroidota
GCA
Cys
>WENV183581992
OOCP01000473
398836
Bacteroidota
GCA
Cys
>WENV183582018
OOCP01000530
398836
Bacteroidota
GCA
Cys
>WENV183582043
OOCP01000569
398836
Bacteroidota
GCA
Cys
>WENV183582353
OOCP01001442
398836
Bacteroidota
GCA
Cys
>WENV183582685
OOCP01003782
398836
Bacteroidota
GCA
Cys
>WENV183582787
OOCP01004858
398836
Bacteroidota
GCA
Cys
>WENV183582993
OOCP01007802
398836
Bacteroidota
GCA
Cys
>WENV183583138
OOCP01011806
398836
Bacteroidota
GCA
Cys
>WENV183581960
OOCP01000432
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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