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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183586433
OOCT01000017
285360
Bacteroidota
TTT
Lys
>WENV183586637
OOCT01000208
117741
Bacteroidota
TAG
Leu
>WENV183586575
OOCT01000120
398829
Bacteroidota
CCT
Arg
>WENV183586648
OOCT01000218
404226
Bacteroidota
CCT
Arg
>WENV183586926
OOCT01000872
175904
Bacteroidota
CGG
Pro
>WENV183586639
OOCT01000212
280553
Bacteroidota
TTT
Lys
>WENV183586813
OOCT01000467
280553
Bacteroidota
TTT
Lys
>WENV183586493
OOCT01000052
280557
Bacteroidota
CAT
Met
>WENV183586801
OOCT01000418
280557
Bacteroidota
CAT
Met
>WENV183586468
OOCT01000036
20492
Bacteroidota
GGA
Ser
>WENV183586968
OOCT01001191
20492
Bacteroidota
GGA
Ser
>WENV183586466
OOCT01000035
20206
Bacteroidota
GGA
Ser
>WENV183586646
OOCT01000218
398871
Bacteroidota
TTC
Glu
>WENV183586647
OOCT01000218
398871
Bacteroidota
TTC
Glu
>WENV183586681
OOCT01000258
201819
Bacteroidota
CAT
Met
>WENV183586397
OOCT01000004
56493
Bacteroidota
TGA
Ser
>WENV183586511
OOCT01000058
56493
Bacteroidota
TGA
Ser
>WENV183586437
OOCT01000018
175906
Bacteroidota
GTG
His
>WENV183586438
OOCT01000018
175906
Bacteroidota
GTG
His
>WENV183586439
OOCT01000018
175906
Bacteroidota
GTG
His
>WENV183586384
OOCT01000001
175903
Bacteroidota
GTG
His
>WENV183586487
OOCT01000046
351598
Bacteroidota
CGG
Pro
>WENV183586507
OOCT01000056
351598
Bacteroidota
CGG
Pro
>WENV183586514
OOCT01000059
351598
Bacteroidota
CGG
Pro
>WENV183586541
OOCT01000082
351598
Bacteroidota
CGG
Pro
>WENV183586765
OOCT01000354
351598
Bacteroidota
CGG
Pro
>WENV183586483
OOCT01000045
118089
Bacteroidota
TAG
Leu
>WENV183586927
OOCT01000872
280530
Bacteroidota
CCA
Trp
>WENV183586802
OOCT01000430
203954
Bacteroidota
GTC
Asp
>WENV183586886
OOCT01000629
203954
Bacteroidota
GTC
Asp
>WENV183586616
OOCT01000175
178907
Bacteroidota
TCT
Arg
>WENV183586770
OOCT01000363
172085
Bacteroidota
TAC
Val
>WENV183587071
OOCT01002503
172085
Bacteroidota
TAC
Val
>WENV183586560
OOCT01000112
29791
Bacteroidota
GCT
Ser
>WENV183586713
OOCT01000284
20449
Bacteroidota
GGA
Ser
>WENV183586558
OOCT01000111
56072
Bacteroidota
TAA
Leu
>WENV183586535
OOCT01000074
175944
Bacteroidota
CAT
Met
>WENV183586401
OOCT01000006
175902
Bacteroidota
GGC
Ala
>WENV183586435
OOCT01000017
398860
Bacteroidota
CTC
Glu
>WENV183586561
OOCT01000112
398860
Bacteroidota
CTC
Glu
>WENV183586556
OOCT01000110
480404
Bacteroidota
TTG
Gln
>WENV183586420
OOCT01000012
174201
Bacteroidota
GGG
Pro
>WENV183586446
OOCT01000023
174201
Bacteroidota
GGG
Pro
>WENV183586467
OOCT01000035
174201
Bacteroidota
GGG
Pro
>WENV183586580
OOCT01000128
280451
Bacteroidota
CGT
Thr
>WENV183586415
OOCT01000010
99847
Bacteroidota
GTA
Tyr
>WENV183586445
OOCT01000022
99847
Bacteroidota
GTA
Tyr
>WENV183586451
OOCT01000028
99847
Bacteroidota
GTA
Tyr
>WENV183587122
OOCT01005759
99847
Bacteroidota
GTA
Tyr
>WENV183586441
OOCT01000018
399200
Bacteroidota
CAT
Met
>WENV183586755
OOCT01000330
399200
Bacteroidota
CAT
Met
>WENV183586657
OOCT01000231
404109
Bacteroidota
CTC
Glu
>WENV183586471
OOCT01000040
46648
Bacteroidota
TAA
Leu
>WENV183586465
OOCT01000035
488746
Bacteroidota
CTG
Gln
>WENV183586504
OOCT01000055
118432
Bacteroidota
CAG
Leu
>WENV183586589
OOCT01000144
280478
Bacteroidota
GCC
Gly
>WENV183586654
OOCT01000228
280478
Bacteroidota
GCC
Gly
>WENV183586398
OOCT01000004
27524
Bacteroidota
GGA
Ser
>WENV183586607
OOCT01000160
175844
Bacteroidota
GGC
Ala
>WENV183586484
OOCT01000045
73011
Bacteroidota
CAA
Leu
>WENV183586593
OOCT01000147
398828
Bacteroidota
CCG
Arg
>WENV183586655
OOCT01000231
191205
Bacteroidota
TGG
Pro
>WENV183586590
OOCT01000144
74084
Bacteroidota
CAG
Leu
>WENV183586717
OOCT01000296
74084
Bacteroidota
CAG
Leu
>WENV183586422
OOCT01000014
159415
Bacteroidota
TAC
Val
>WENV183586562
OOCT01000115
480325
Bacteroidota
CTG
Gln
>WENV183586563
OOCT01000115
480325
Bacteroidota
CTG
Gln
>WENV183586411
OOCT01000009
140771
Bacteroidota
>WENV183586450
OOCT01000025
176192
Bacteroidota
TCT
Arg
>WENV183586618
OOCT01000178
400088
Bacteroidota
GGT
Thr
>WENV183586386
OOCT01000001
69204
Bacteroidota
TGA
Ser
>WENV183586396
OOCT01000004
69204
Bacteroidota
TGA
Ser
>WENV183586550
OOCT01000091
69204
Bacteroidota
TGA
Ser
>WENV183586609
OOCT01000162
69204
Bacteroidota
TGA
Ser
>WENV183586417
OOCT01000010
280446
Bacteroidota
TTT
Lys
>WENV183586882
OOCT01000609
280446
Bacteroidota
TTT
Lys
>WENV183586965
OOCT01001175
280446
Bacteroidota
TTT
Lys
>WENV183586488
OOCT01000047
484496
Bacteroidota
TTG
Gln
>WENV183586598
OOCT01000149
484496
Bacteroidota
TTG
Gln
>WENV183586784
OOCT01000378
484496
Bacteroidota
TTG
Gln
>WENV183586385
OOCT01000001
27502
Bacteroidota
GGA
Ser
>WENV183586601
OOCT01000153
27502
Bacteroidota
GGA
Ser
>WENV183586918
OOCT01000811
27502
Bacteroidota
GGA
Ser
>WENV183586617
OOCT01000175
285750
Bacteroidota
CCC
Gly
>WENV183586505
OOCT01000055
73509
Bacteroidota
GAG
Leu
>WENV183586409
OOCT01000007
365112
Bacteroidota
TTT
Lys
>WENV183586526
OOCT01000067
365112
Bacteroidota
TTT
Lys
>WENV183586623
OOCT01000184
365112
Bacteroidota
TTT
Lys
>WENV183586897
OOCT01000675
365112
Bacteroidota
TTT
Lys
>WENV183586405
OOCT01000006
398836
Bacteroidota
GCA
Cys
>WENV183586510
OOCT01000057
398836
Bacteroidota
GCA
Cys
>WENV183586635
OOCT01000204
398836
Bacteroidota
GCA
Cys
>WENV183586775
OOCT01000369
398836
Bacteroidota
GCA
Cys
>WENV183586982
OOCT01001312
398836
Bacteroidota
GCA
Cys
>WENV183586701
OOCT01000278
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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