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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183588108
OOCV01000020
172207
Bacteroidota
GGG
Pro
>WENV183588421
OOCV01000534
172207
Bacteroidota
GGG
Pro
>WENV183588232
OOCV01000122
117741
Bacteroidota
TAG
Leu
>WENV183588057
OOCV01000001
398829
Bacteroidota
CCT
Arg
>WENV183588055
OOCV01000001
175838
Bacteroidota
GTT
Asn
>WENV183588056
OOCV01000001
175838
Bacteroidota
GTT
Asn
>WENV183588445
OOCV01000712
404226
Bacteroidota
CCT
Arg
>WENV183588855
OOCV01014782
175904
Bacteroidota
CGG
Pro
>WENV183588859
OOCV01015912
175904
Bacteroidota
CGG
Pro
>WENV183588361
OOCV01000357
289031
Bacteroidota
CAT
Met
>WENV183588088
OOCV01000012
280557
Bacteroidota
CAT
Met
>WENV183588372
OOCV01000414
280557
Bacteroidota
CAT
Met
>WENV183588373
OOCV01000414
280557
Bacteroidota
CAT
Met
>WENV183588107
OOCV01000020
20206
Bacteroidota
GGA
Ser
>WENV183588123
OOCV01000032
483416
Bacteroidota
CTG
Gln
>WENV183588991
OOCV01036616
398871
Bacteroidota
TTC
Glu
>WENV183588126
OOCV01000033
56493
Bacteroidota
TGA
Ser
>WENV183588634
OOCV01002770
56493
Bacteroidota
TGA
Ser
>WENV183588511
OOCV01001153
175906
Bacteroidota
GTG
His
>WENV183588095
OOCV01000014
175903
Bacteroidota
GTG
His
>WENV183588063
OOCV01000002
351598
Bacteroidota
CGG
Pro
>WENV183588572
OOCV01001795
118089
Bacteroidota
TAG
Leu
>WENV183588928
OOCV01024392
203954
Bacteroidota
GTC
Asp
>WENV183588618
OOCV01002476
178907
Bacteroidota
TCT
Arg
>WENV183588103
OOCV01000019
172085
Bacteroidota
TAC
Val
>WENV183588104
OOCV01000019
172085
Bacteroidota
TAC
Val
>WENV183588212
OOCV01000100
182267
Bacteroidota
GTT
Asn
>WENV183588213
OOCV01000100
182267
Bacteroidota
GTT
Asn
>WENV183588214
OOCV01000100
182267
Bacteroidota
GTT
Asn
>WENV183588755
OOCV01006003
20449
Bacteroidota
GGA
Ser
>WENV183588059
OOCV01000001
56072
Bacteroidota
TAA
Leu
>WENV183588062
OOCV01000002
56072
Bacteroidota
TAA
Leu
>WENV183588219
OOCV01000103
175944
Bacteroidota
CAT
Met
>WENV183588163
OOCV01000048
175902
Bacteroidota
GGC
Ala
>WENV183588074
OOCV01000004
280451
Bacteroidota
CGT
Thr
>WENV183588197
OOCV01000076
99847
Bacteroidota
GTA
Tyr
>WENV183588885
OOCV01018377
99847
Bacteroidota
GTA
Tyr
>WENV183588644
OOCV01002876
399200
Bacteroidota
CAT
Met
>WENV183588695
OOCV01003986
399200
Bacteroidota
CAT
Met
>WENV183588856
OOCV01015183
399200
Bacteroidota
CAT
Met
>WENV183588335
OOCV01000295
404109
Bacteroidota
CTC
Glu
>WENV183588230
OOCV01000117
186874
Bacteroidota
CAT
Met
>WENV183588900
OOCV01021044
180199
Bacteroidota
CAT
Met
>WENV183588206
OOCV01000096
46648
Bacteroidota
TAA
Leu
>WENV183588106
OOCV01000020
488746
Bacteroidota
CTG
Gln
>WENV183588085
OOCV01000011
118432
Bacteroidota
CAG
Leu
>WENV183588455
OOCV01000759
280478
Bacteroidota
GCC
Gly
>WENV183588457
OOCV01000759
280478
Bacteroidota
GCC
Gly
>WENV183588550
OOCV01001581
280478
Bacteroidota
GCC
Gly
>WENV183588560
OOCV01001706
280478
Bacteroidota
GCC
Gly
>WENV183588563
OOCV01001721
280478
Bacteroidota
GCC
Gly
>WENV183588743
OOCV01005385
175844
Bacteroidota
GGC
Ala
>WENV183588717
OOCV01004627
73011
Bacteroidota
CAA
Leu
>WENV183588073
OOCV01000004
398828
Bacteroidota
CCG
Arg
>WENV183588175
OOCV01000055
191205
Bacteroidota
TGG
Pro
>WENV183588656
OOCV01003012
74084
Bacteroidota
CAG
Leu
>WENV183588617
OOCV01002469
480325
Bacteroidota
CTG
Gln
>WENV183588109
OOCV01000021
140771
Bacteroidota
>WENV183588491
OOCV01001018
176192
Bacteroidota
TCT
Arg
>WENV183588895
OOCV01020435
176192
Bacteroidota
TCT
Arg
>WENV183588880
OOCV01018010
400088
Bacteroidota
GGT
Thr
>WENV183588132
OOCV01000035
69204
Bacteroidota
TGA
Ser
>WENV183588174
OOCV01000053
69204
Bacteroidota
TGA
Ser
>WENV183588188
OOCV01000064
69204
Bacteroidota
TGA
Ser
>WENV183588079
OOCV01000008
280446
Bacteroidota
TTT
Lys
>WENV183588101
OOCV01000017
280446
Bacteroidota
TTT
Lys
>WENV183588366
OOCV01000390
280446
Bacteroidota
TTT
Lys
>WENV183588097
OOCV01000015
484496
Bacteroidota
TTG
Gln
>WENV183588096
OOCV01000014
27502
Bacteroidota
GGA
Ser
>WENV183588443
OOCV01000689
27502
Bacteroidota
GGA
Ser
>WENV183588693
OOCV01003879
27502
Bacteroidota
GGA
Ser
>WENV183588760
OOCV01006210
117804
Bacteroidota
TAG
Leu
>WENV183588086
OOCV01000011
73509
Bacteroidota
GAG
Leu
>WENV183588325
OOCV01000263
365112
Bacteroidota
TTT
Lys
>WENV183588481
OOCV01000882
365112
Bacteroidota
TTT
Lys
>WENV183588092
OOCV01000013
398836
Bacteroidota
GCA
Cys
>WENV183588093
OOCV01000013
398836
Bacteroidota
GCA
Cys
>WENV183588128
OOCV01000034
398836
Bacteroidota
GCA
Cys
>WENV183588281
OOCV01000182
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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