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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183590561
OOCX01000918
398829
Bacteroidota
CCT
Arg
>WENV183590437
OOCX01000455
404226
Bacteroidota
CCT
Arg
>WENV183590933
OOCX01006399
175904
Bacteroidota
CGG
Pro
>WENV183590241
OOCX01000114
289031
Bacteroidota
CAT
Met
>WENV183590533
OOCX01000784
289031
Bacteroidota
CAT
Met
>WENV183590431
OOCX01000442
280557
Bacteroidota
CAT
Met
>WENV183590502
OOCX01000679
280557
Bacteroidota
CAT
Met
>WENV183590870
OOCX01004459
483416
Bacteroidota
CTG
Gln
>WENV183590163
OOCX01000055
56493
Bacteroidota
TGA
Ser
>WENV183590329
OOCX01000209
175903
Bacteroidota
GTG
His
>WENV183590462
OOCX01000541
351598
Bacteroidota
CGG
Pro
>WENV183591147
OOCX01021977
291612
Bacteroidota
>WENV183590684
OOCX01001768
118089
Bacteroidota
TAG
Leu
>WENV183590804
OOCX01003371
405877
Bacteroidota
GGT
Thr
>WENV183590266
OOCX01000134
182267
Bacteroidota
GTT
Asn
>WENV183590267
OOCX01000134
182267
Bacteroidota
GTT
Asn
>WENV183590850
OOCX01004090
20449
Bacteroidota
GGA
Ser
>WENV183590771
OOCX01002817
21127
Bacteroidota
GGA
Ser
>WENV183590362
OOCX01000291
56072
Bacteroidota
TAA
Leu
>WENV183590721
OOCX01002104
56072
Bacteroidota
TAA
Leu
>WENV183590328
OOCX01000204
57807
Bacteroidota
TGA
Ser
>WENV183590874
OOCX01004532
175902
Bacteroidota
GGC
Ala
>WENV183590672
OOCX01001675
480404
Bacteroidota
TTG
Gln
>WENV183590950
OOCX01006888
280451
Bacteroidota
CGT
Thr
>WENV183590746
OOCX01002553
99847
Bacteroidota
GTA
Tyr
>WENV183591040
OOCX01012385
99847
Bacteroidota
GTA
Tyr
>WENV183590685
OOCX01001773
399200
Bacteroidota
CAT
Met
>WENV183590731
OOCX01002232
186874
Bacteroidota
CAT
Met
>WENV183590488
OOCX01000649
332896
Bacteroidota
TTT
Lys
>WENV183590542
OOCX01000816
332896
Bacteroidota
TTT
Lys
>WENV183590792
OOCX01003195
488746
Bacteroidota
CTG
Gln
>WENV183590753
OOCX01002693
280478
Bacteroidota
GCC
Gly
>WENV183590888
OOCX01004804
20766
Bacteroidota
GGA
Ser
>WENV183590590
OOCX01001086
158068
Bacteroidota
GGG
Pro
>WENV183591030
OOCX01011915
186142
Bacteroidota
GAT
Ile
>WENV183590562
OOCX01000919
398828
Bacteroidota
CCG
Arg
>WENV183590944
OOCX01006720
159415
Bacteroidota
TAC
Val
>WENV183590417
OOCX01000401
484496
Bacteroidota
TTG
Gln
>WENV183590891
OOCX01004875
188555
Bacteroidota
CAT
Met
>WENV183591031
OOCX01011915
186143
Bacteroidota
TGC
Ala
>WENV183590164
OOCX01000055
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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