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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183592435
OOCZ01000293
117741
Bacteroidota
TAG
Leu
>WENV183592276
OOCZ01000076
398829
Bacteroidota
CCT
Arg
>WENV183592517
OOCZ01000570
398829
Bacteroidota
CCT
Arg
>WENV183592764
OOCZ01002696
175904
Bacteroidota
CGG
Pro
>WENV183592733
OOCZ01002154
289031
Bacteroidota
CAT
Met
>WENV183593133
OOCZ01019081
280553
Bacteroidota
TTT
Lys
>WENV183592261
OOCZ01000059
280557
Bacteroidota
CAT
Met
>WENV183592317
OOCZ01000123
280557
Bacteroidota
CAT
Met
>WENV183592423
OOCZ01000249
280557
Bacteroidota
CAT
Met
>WENV183592250
OOCZ01000051
20206
Bacteroidota
GGA
Ser
>WENV183592184
OOCZ01000008
483416
Bacteroidota
CTG
Gln
>WENV183592190
OOCZ01000011
483416
Bacteroidota
CTG
Gln
>WENV183593049
OOCZ01011192
398871
Bacteroidota
TTC
Glu
>WENV183592458
OOCZ01000342
56493
Bacteroidota
TGA
Ser
>WENV183592748
OOCZ01002488
118089
Bacteroidota
TAG
Leu
>WENV183592256
OOCZ01000054
405877
Bacteroidota
GGT
Thr
>WENV183592802
OOCZ01003279
182267
Bacteroidota
GTT
Asn
>WENV183593231
OOCZ01038774
20449
Bacteroidota
GGA
Ser
>WENV183592252
OOCZ01000052
21127
Bacteroidota
GGA
Ser
>WENV183592355
OOCZ01000144
56072
Bacteroidota
TAA
Leu
>WENV183592623
OOCZ01001064
56072
Bacteroidota
TAA
Leu
>WENV183593057
OOCZ01011874
56072
Bacteroidota
TAA
Leu
>WENV183592352
OOCZ01000139
57807
Bacteroidota
TGA
Ser
>WENV183593044
OOCZ01010475
57807
Bacteroidota
TGA
Ser
>WENV183592257
OOCZ01000055
280451
Bacteroidota
CGT
Thr
>WENV183592964
OOCZ01007118
418894
Bacteroidota
TTC
Glu
>WENV183592420
OOCZ01000246
99847
Bacteroidota
GTA
Tyr
>WENV183592425
OOCZ01000262
99847
Bacteroidota
GTA
Tyr
>WENV183592991
OOCZ01007999
399200
Bacteroidota
CAT
Met
>WENV183592223
OOCZ01000032
186874
Bacteroidota
CAT
Met
>WENV183592277
OOCZ01000078
332896
Bacteroidota
TTT
Lys
>WENV183592496
OOCZ01000445
332896
Bacteroidota
TTT
Lys
>WENV183592249
OOCZ01000051
488746
Bacteroidota
CTG
Gln
>WENV183592869
OOCZ01004658
280478
Bacteroidota
GCC
Gly
>WENV183592532
OOCZ01000621
20766
Bacteroidota
GGA
Ser
>WENV183593066
OOCZ01012457
186108
Bacteroidota
GTT
Asn
>WENV183593134
OOCZ01019404
175844
Bacteroidota
GGC
Ala
>WENV183592937
OOCZ01006342
480318
Bacteroidota
CTG
Gln
>WENV183592248
OOCZ01000051
158068
Bacteroidota
GGG
Pro
>WENV183592483
OOCZ01000412
158068
Bacteroidota
GGG
Pro
>WENV183593093
OOCZ01014627
186142
Bacteroidota
GAT
Ile
>WENV183592302
OOCZ01000106
398828
Bacteroidota
CCG
Arg
>WENV183592275
OOCZ01000075
280446
Bacteroidota
TTT
Lys
>WENV183592432
OOCZ01000282
280446
Bacteroidota
TTT
Lys
>WENV183592377
OOCZ01000161
484496
Bacteroidota
TTG
Gln
>WENV183592419
OOCZ01000243
484496
Bacteroidota
TTG
Gln
>WENV183593266
OOCZ01047679
156467
Bacteroidota
TGG
Pro
>WENV183592534
OOCZ01000625
398836
Bacteroidota
GCA
Cys
>WENV183592707
OOCZ01001810
398836
Bacteroidota
GCA
Cys
>WENV183592783
OOCZ01002884
398836
Bacteroidota
GCA
Cys
>WENV183592886
OOCZ01005088
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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