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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183593669
OODB01000437
117741
Bacteroidota
TAG
Leu
>WENV183594485
OODB01036706
175904
Bacteroidota
CGG
Pro
>WENV183593453
OODB01000085
280557
Bacteroidota
CAT
Met
>WENV183593640
OODB01000387
280557
Bacteroidota
CAT
Met
>WENV183593566
OODB01000232
20206
Bacteroidota
GGA
Ser
>WENV183594300
OODB01011566
398871
Bacteroidota
TTC
Glu
>WENV183593365
OODB01000020
56493
Bacteroidota
TGA
Ser
>WENV183593694
OODB01000527
56493
Bacteroidota
TGA
Ser
>WENV183594367
OODB01015466
175906
Bacteroidota
GTG
His
>WENV183593389
OODB01000031
175903
Bacteroidota
GTG
His
>WENV183593440
OODB01000063
156068
Bacteroidota
TAC
Val
>WENV183594085
OODB01003974
118089
Bacteroidota
TAG
Leu
>WENV183594469
OODB01033166
405877
Bacteroidota
GGT
Thr
>WENV183594270
OODB01009742
178133
Bacteroidota
GAT
Ile
>WENV183594031
OODB01002999
56072
Bacteroidota
TAA
Leu
>WENV183593534
OODB01000175
57807
Bacteroidota
TGA
Ser
>WENV183593607
OODB01000324
280451
Bacteroidota
CGT
Thr
>WENV183593377
OODB01000025
99847
Bacteroidota
GTA
Tyr
>WENV183593615
OODB01000346
99847
Bacteroidota
GTA
Tyr
>WENV183594067
OODB01003591
399200
Bacteroidota
CAT
Met
>WENV183593505
OODB01000137
488746
Bacteroidota
CTG
Gln
>WENV183593565
OODB01000232
488746
Bacteroidota
CTG
Gln
>WENV183594165
OODB01005561
280478
Bacteroidota
GCC
Gly
>WENV183593506
OODB01000137
20766
Bacteroidota
GGA
Ser
>WENV183593399
OODB01000037
187400
Bacteroidota
GTT
Asn
>WENV183593400
OODB01000037
187400
Bacteroidota
GTT
Asn
>WENV183593567
OODB01000232
158068
Bacteroidota
GGG
Pro
>WENV183593621
OODB01000354
398828
Bacteroidota
CCG
Arg
>WENV183593685
OODB01000505
398828
Bacteroidota
CCG
Arg
>WENV183594343
OODB01014115
74084
Bacteroidota
CAG
Leu
>WENV183594415
OODB01021018
159415
Bacteroidota
TAC
Val
>WENV183593523
OODB01000164
280446
Bacteroidota
TTT
Lys
>WENV183593600
OODB01000310
484496
Bacteroidota
TTG
Gln
>WENV183593657
OODB01000422
484496
Bacteroidota
TTG
Gln
>WENV183594084
OODB01003893
484496
Bacteroidota
TTG
Gln
>WENV183593637
OODB01000384
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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