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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183596558
OODE01000800
117741
Bacteroidota
TAG
Leu
>WENV183596445
OODE01000321
398829
Bacteroidota
CCT
Arg
>WENV183596634
OODE01001338
404226
Bacteroidota
CCT
Arg
>WENV183597115
OODE01042536
175904
Bacteroidota
CGG
Pro
>WENV183596681
OODE01001832
280553
Bacteroidota
TTT
Lys
>WENV183596555
OODE01000790
280557
Bacteroidota
CAT
Met
>WENV183596570
OODE01000927
20206
Bacteroidota
GGA
Ser
>WENV183596836
OODE01004349
201819
Bacteroidota
CAT
Met
>WENV183596342
OODE01000139
56493
Bacteroidota
TGA
Ser
>WENV183596443
OODE01000307
56493
Bacteroidota
TGA
Ser
>WENV183596928
OODE01007669
56493
Bacteroidota
TGA
Ser
>WENV183596640
OODE01001385
175906
Bacteroidota
GTG
His
>WENV183596422
OODE01000290
175903
Bacteroidota
GTG
His
>WENV183596647
OODE01001423
118089
Bacteroidota
TAG
Leu
>WENV183596727
OODE01002428
118089
Bacteroidota
TAG
Leu
>WENV183596662
OODE01001571
178907
Bacteroidota
TCT
Arg
>WENV183596897
OODE01006402
182267
Bacteroidota
GTT
Asn
>WENV183596862
OODE01004946
20449
Bacteroidota
GGA
Ser
>WENV183596965
OODE01010494
178133
Bacteroidota
GAT
Ile
>WENV183596833
OODE01004261
57807
Bacteroidota
TGA
Ser
>WENV183596603
OODE01001140
175902
Bacteroidota
GGC
Ala
>WENV183596806
OODE01003602
280451
Bacteroidota
CGT
Thr
>WENV183596393
OODE01000211
99847
Bacteroidota
GTA
Tyr
>WENV183596835
OODE01004312
99847
Bacteroidota
GTA
Tyr
>WENV183596767
OODE01003240
399200
Bacteroidota
CAT
Met
>WENV183596341
OODE01000138
332896
Bacteroidota
TTT
Lys
>WENV183596539
OODE01000712
332896
Bacteroidota
TTT
Lys
>WENV183596597
OODE01001086
332896
Bacteroidota
TTT
Lys
>WENV183596517
OODE01000578
488746
Bacteroidota
CTG
Gln
>WENV183596233
OODE01000026
280478
Bacteroidota
GCC
Gly
>WENV183597127
OODE01046190
20766
Bacteroidota
GGA
Ser
>WENV183596935
OODE01008207
175844
Bacteroidota
GGC
Ala
>WENV183596352
OODE01000157
73011
Bacteroidota
CAA
Leu
>WENV183596197
OODE01000006
158068
Bacteroidota
GGG
Pro
>WENV183596409
OODE01000268
158068
Bacteroidota
GGG
Pro
>WENV183596532
OODE01000675
398828
Bacteroidota
CCG
Arg
>WENV183596601
OODE01001124
74084
Bacteroidota
CAG
Leu
>WENV183596674
OODE01001681
480325
Bacteroidota
CTG
Gln
>WENV183596491
OODE01000438
176192
Bacteroidota
TCT
Arg
>WENV183596504
OODE01000471
280446
Bacteroidota
TTT
Lys
>WENV183596636
OODE01001356
484496
Bacteroidota
TTG
Gln
>WENV183596724
OODE01002386
484496
Bacteroidota
TTG
Gln
>WENV183596529
OODE01000652
398836
Bacteroidota
GCA
Cys
>WENV183596530
OODE01000652
398836
Bacteroidota
GCA
Cys
>WENV183596567
OODE01000897
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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