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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183597372
OODF01000294
285360
Bacteroidota
TTT
Lys
>WENV183597309
OODF01000183
117741
Bacteroidota
TAG
Leu
>WENV183597624
OODF01001564
398829
Bacteroidota
CCT
Arg
>WENV183597903
OODF01011217
175904
Bacteroidota
CGG
Pro
>WENV183597810
OODF01006340
289031
Bacteroidota
CAT
Met
>WENV183597273
OODF01000123
280557
Bacteroidota
CAT
Met
>WENV183597283
OODF01000135
280557
Bacteroidota
CAT
Met
>WENV183598046
OODF01043758
280557
Bacteroidota
CAT
Met
>WENV183597331
OODF01000218
20492
Bacteroidota
GGA
Ser
>WENV183597188
OODF01000029
20206
Bacteroidota
GGA
Ser
>WENV183597790
OODF01005694
398871
Bacteroidota
TTC
Glu
>WENV183597791
OODF01005694
398871
Bacteroidota
TTC
Glu
>WENV183597204
OODF01000044
56493
Bacteroidota
TGA
Ser
>WENV183597763
OODF01004316
56493
Bacteroidota
TGA
Ser
>WENV183597619
OODF01001388
175906
Bacteroidota
GTG
His
>WENV183597130
OODF01000001
175903
Bacteroidota
GTG
His
>WENV183597278
OODF01000133
175903
Bacteroidota
GTG
His
>WENV183597337
OODF01000243
351598
Bacteroidota
CGG
Pro
>WENV183597496
OODF01000637
351598
Bacteroidota
CGG
Pro
>WENV183597607
OODF01001264
351598
Bacteroidota
CGG
Pro
>WENV183597536
OODF01000831
118089
Bacteroidota
TAG
Leu
>WENV183597741
OODF01003605
203954
Bacteroidota
GTC
Asp
>WENV183597274
OODF01000130
157895
Bacteroidota
TAC
Val
>WENV183597275
OODF01000130
157895
Bacteroidota
TAC
Val
>WENV183597769
OODF01004879
178907
Bacteroidota
TCT
Arg
>WENV183598008
OODF01032017
29791
Bacteroidota
GCT
Ser
>WENV183597159
OODF01000010
182267
Bacteroidota
GTT
Asn
>WENV183597160
OODF01000010
182267
Bacteroidota
GTT
Asn
>WENV183597746
OODF01003766
20449
Bacteroidota
GGA
Ser
>WENV183597222
OODF01000062
56072
Bacteroidota
TAA
Leu
>WENV183597719
OODF01002924
57807
Bacteroidota
TGA
Ser
>WENV183597625
OODF01001613
175886
Bacteroidota
GGC
Ala
>WENV183597215
OODF01000053
175902
Bacteroidota
GGC
Ala
>WENV183597344
OODF01000257
179697
Bacteroidota
TGT
Thr
>WENV183597622
OODF01001533
280451
Bacteroidota
CGT
Thr
>WENV183597569
OODF01000971
418894
Bacteroidota
TTC
Glu
>WENV183597881
OODF01009788
99847
Bacteroidota
GTA
Tyr
>WENV183597429
OODF01000423
399200
Bacteroidota
CAT
Met
>WENV183597501
OODF01000649
399200
Bacteroidota
CAT
Met
>WENV183597187
OODF01000029
488746
Bacteroidota
CTG
Gln
>WENV183597396
OODF01000357
280478
Bacteroidota
GCC
Gly
>WENV183597398
OODF01000357
280478
Bacteroidota
GCC
Gly
>WENV183597598
OODF01001155
280478
Bacteroidota
GCC
Gly
>WENV183597702
OODF01002589
187400
Bacteroidota
GTT
Asn
>WENV183597540
OODF01000848
175844
Bacteroidota
GGC
Ala
>WENV183597366
OODF01000282
280515
Bacteroidota
CCA
Trp
>WENV183597787
OODF01005626
183889
Bacteroidota
GGC
Ala
>WENV183597355
OODF01000273
398828
Bacteroidota
CCG
Arg
>WENV183597645
OODF01001763
74084
Bacteroidota
CAG
Leu
>WENV183597948
OODF01015686
480325
Bacteroidota
CTG
Gln
>WENV183597203
OODF01000043
280446
Bacteroidota
TTT
Lys
>WENV183597206
OODF01000046
280446
Bacteroidota
TTT
Lys
>WENV183597288
OODF01000144
280446
Bacteroidota
TTT
Lys
>WENV183597432
OODF01000441
280446
Bacteroidota
TTT
Lys
>WENV183597185
OODF01000028
484496
Bacteroidota
TTG
Gln
>WENV183597316
OODF01000195
484496
Bacteroidota
TTG
Gln
>WENV183597848
OODF01007868
285750
Bacteroidota
CCC
Gly
>WENV183597223
OODF01000063
365112
Bacteroidota
TTT
Lys
>WENV183597371
OODF01000292
365112
Bacteroidota
TTT
Lys
>WENV183597610
OODF01001290
365112
Bacteroidota
TTT
Lys
>WENV183597911
OODF01011961
365112
Bacteroidota
TTT
Lys
>WENV183597181
OODF01000026
398836
Bacteroidota
GCA
Cys
>WENV183597298
OODF01000167
398836
Bacteroidota
GCA
Cys
>WENV183597406
OODF01000376
398836
Bacteroidota
GCA
Cys
>WENV183597455
OODF01000510
398836
Bacteroidota
GCA
Cys
>WENV183597497
OODF01000641
398836
Bacteroidota
GCA
Cys
>WENV183597915
OODF01012298
398836
Bacteroidota
GCA
Cys
>WENV183597186
OODF01000029
170323
Bacteroidota
GGG
Pro
>WENV183597348
OODF01000262
170323
Bacteroidota
GGG
Pro
>WENV183597354
OODF01000272
170323
Bacteroidota
GGG
Pro
>WENV183597412
OODF01000391
170323
Bacteroidota
GGG
Pro
>WENV183597423
OODF01000408
170323
Bacteroidota
GGG
Pro
>WENV183597671
OODF01002088
170323
Bacteroidota
GGG
Pro
>WENV183597883
OODF01009847
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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