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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183598865
OODG01007447
285360
Bacteroidota
TTT
Lys
>WENV183598998
OODG01013519
117741
Bacteroidota
TAG
Leu
>WENV183598748
OODG01005271
175838
Bacteroidota
GTT
Asn
>WENV183598749
OODG01005271
175838
Bacteroidota
GTT
Asn
>WENV183599006
OODG01014061
404226
Bacteroidota
CCT
Arg
>WENV183598822
OODG01006306
175904
Bacteroidota
CGG
Pro
>WENV183598487
OODG01001488
289031
Bacteroidota
CAT
Met
>WENV183598569
OODG01002227
289031
Bacteroidota
CAT
Met
>WENV183598502
OODG01001547
280557
Bacteroidota
CAT
Met
>WENV183598368
OODG01000825
483416
Bacteroidota
CTG
Gln
>WENV183598582
OODG01002500
483416
Bacteroidota
CTG
Gln
>WENV183599094
OODG01024245
398871
Bacteroidota
TTC
Glu
>WENV183598217
OODG01000329
56493
Bacteroidota
TGA
Ser
>WENV183598354
OODG01000775
56493
Bacteroidota
TGA
Ser
>WENV183598482
OODG01001458
175903
Bacteroidota
GTG
His
>WENV183598521
OODG01001700
291612
Bacteroidota
>WENV183598921
OODG01009682
118089
Bacteroidota
TAG
Leu
>WENV183599019
OODG01015427
280530
Bacteroidota
CCA
Trp
>WENV183598888
OODG01008318
29791
Bacteroidota
GCT
Ser
>WENV183598700
OODG01004200
20449
Bacteroidota
GGA
Ser
>WENV183598511
OODG01001626
21127
Bacteroidota
GGA
Ser
>WENV183598170
OODG01000182
56072
Bacteroidota
TAA
Leu
>WENV183598698
OODG01004193
56072
Bacteroidota
TAA
Leu
>WENV183598221
OODG01000343
57807
Bacteroidota
TGA
Ser
>WENV183598634
OODG01003280
175886
Bacteroidota
GGC
Ala
>WENV183598607
OODG01002854
175902
Bacteroidota
GGC
Ala
>WENV183598122
OODG01000084
179697
Bacteroidota
TGT
Thr
>WENV183598889
OODG01008318
398860
Bacteroidota
CTC
Glu
>WENV183598986
OODG01012741
480404
Bacteroidota
TTG
Gln
>WENV183599157
OODG01040474
280451
Bacteroidota
CGT
Thr
>WENV183598168
OODG01000181
99847
Bacteroidota
GTA
Tyr
>WENV183598333
OODG01000726
99847
Bacteroidota
GTA
Tyr
>WENV183598466
OODG01001338
99847
Bacteroidota
GTA
Tyr
>WENV183598572
OODG01002328
99847
Bacteroidota
GTA
Tyr
>WENV183599037
OODG01017130
399200
Bacteroidota
CAT
Met
>WENV183598213
OODG01000311
186874
Bacteroidota
CAT
Met
>WENV183599077
OODG01020990
186874
Bacteroidota
CAT
Met
>WENV183598141
OODG01000114
189252
Bacteroidota
GGC
Ala
>WENV183598756
OODG01005381
488746
Bacteroidota
CTG
Gln
>WENV183598832
OODG01006475
186108
Bacteroidota
GTT
Asn
>WENV183598475
OODG01001416
175844
Bacteroidota
GGC
Ala
>WENV183598706
OODG01004373
183889
Bacteroidota
GGC
Ala
>WENV183599023
OODG01015629
183889
Bacteroidota
GGC
Ala
>WENV183598115
OODG01000070
158068
Bacteroidota
GGG
Pro
>WENV183598130
OODG01000095
158068
Bacteroidota
GGG
Pro
>WENV183598707
OODG01004381
158068
Bacteroidota
GGG
Pro
>WENV183598731
OODG01005024
158068
Bacteroidota
GGG
Pro
>WENV183599092
OODG01023830
186142
Bacteroidota
GAT
Ile
>WENV183598949
OODG01011199
398828
Bacteroidota
CCG
Arg
>WENV183599026
OODG01015762
74084
Bacteroidota
CAG
Leu
>WENV183598855
OODG01007296
159415
Bacteroidota
TAC
Val
>WENV183598388
OODG01000980
176192
Bacteroidota
TCT
Arg
>WENV183598723
OODG01004824
176192
Bacteroidota
TCT
Arg
>WENV183598927
OODG01009868
295349
Bacteroidota
CCA
Trp
>WENV183598200
OODG01000278
484496
Bacteroidota
TTG
Gln
>WENV183598372
OODG01000840
484496
Bacteroidota
TTG
Gln
>WENV183599031
OODG01016016
285750
Bacteroidota
CCC
Gly
>WENV183599093
OODG01023830
186143
Bacteroidota
TGC
Ala
>WENV183598358
OODG01000784
398836
Bacteroidota
GCA
Cys
>WENV183598708
OODG01004410
398836
Bacteroidota
GCA
Cys
>WENV183598728
OODG01004959
398836
Bacteroidota
GCA
Cys
>WENV183598866
OODG01007536
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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