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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183599236
OODH01000047
398829
Bacteroidota
CCT
Arg
>WENV183599500
OODH01001102
398829
Bacteroidota
CCT
Arg
>WENV183599279
OODH01000119
175838
Bacteroidota
GTT
Asn
>WENV183600051
OODH01052731
404226
Bacteroidota
CCT
Arg
>WENV183599667
OODH01003409
289031
Bacteroidota
CAT
Met
>WENV183599585
OODH01002052
156422
Bacteroidota
TAC
Val
>WENV183599428
OODH01000594
280557
Bacteroidota
CAT
Met
>WENV183599316
OODH01000204
483416
Bacteroidota
CTG
Gln
>WENV183599987
OODH01033405
398871
Bacteroidota
TTC
Glu
>WENV183599188
OODH01000003
56493
Bacteroidota
TGA
Ser
>WENV183599256
OODH01000067
56493
Bacteroidota
TGA
Ser
>WENV183599447
OODH01000704
56493
Bacteroidota
TGA
Ser
>WENV183599888
OODH01018341
175906
Bacteroidota
GTG
His
>WENV183599473
OODH01000864
175903
Bacteroidota
GTG
His
>WENV183600005
OODH01037405
291612
Bacteroidota
>WENV183599636
OODH01002936
118089
Bacteroidota
TAG
Leu
>WENV183599638
OODH01002972
156406
Bacteroidota
TAC
Val
>WENV183600050
OODH01051680
178907
Bacteroidota
TCT
Arg
>WENV183599846
OODH01013772
405877
Bacteroidota
GGT
Thr
>WENV183599654
OODH01003254
29791
Bacteroidota
GCT
Ser
>WENV183599178
OODH01000001
182267
Bacteroidota
GTT
Asn
>WENV183599568
OODH01001827
182267
Bacteroidota
GTT
Asn
>WENV183599677
OODH01003675
182267
Bacteroidota
GTT
Asn
>WENV183599366
OODH01000372
20449
Bacteroidota
GGA
Ser
>WENV183599726
OODH01005148
404663
Bacteroidota
GGT
Thr
>WENV183599327
OODH01000243
56072
Bacteroidota
TAA
Leu
>WENV183599405
OODH01000500
57807
Bacteroidota
TGA
Ser
>WENV183599688
OODH01004026
57807
Bacteroidota
TGA
Ser
>WENV183599648
OODH01003095
175886
Bacteroidota
GGC
Ala
>WENV183599698
OODH01004189
179697
Bacteroidota
TGT
Thr
>WENV183599655
OODH01003254
398860
Bacteroidota
CTC
Glu
>WENV183599833
OODH01012329
280451
Bacteroidota
CGT
Thr
>WENV183599328
OODH01000253
99847
Bacteroidota
GTA
Tyr
>WENV183599390
OODH01000452
99847
Bacteroidota
GTA
Tyr
>WENV183599496
OODH01001066
99847
Bacteroidota
GTA
Tyr
>WENV183599671
OODH01003518
99847
Bacteroidota
GTA
Tyr
>WENV183599634
OODH01002903
399200
Bacteroidota
CAT
Met
>WENV183599580
OODH01002019
186874
Bacteroidota
CAT
Met
>WENV183599320
OODH01000219
178179
Bacteroidota
GGC
Ala
>WENV183599590
OODH01002182
280478
Bacteroidota
GCC
Gly
>WENV183599774
OODH01007581
280478
Bacteroidota
GCC
Gly
>WENV183599354
OODH01000325
20766
Bacteroidota
GGA
Ser
>WENV183599797
OODH01009042
73011
Bacteroidota
CAA
Leu
>WENV183599469
OODH01000851
280515
Bacteroidota
CCA
Trp
>WENV183599321
OODH01000222
398828
Bacteroidota
CCG
Arg
>WENV183599358
OODH01000340
398828
Bacteroidota
CCG
Arg
>WENV183599775
OODH01007581
74084
Bacteroidota
CAG
Leu
>WENV183599841
OODH01013431
480325
Bacteroidota
CTG
Gln
>WENV183599296
OODH01000151
176192
Bacteroidota
TCT
Arg
>WENV183600042
OODH01046361
176192
Bacteroidota
TCT
Arg
>WENV183599270
OODH01000096
484496
Bacteroidota
TTG
Gln
>WENV183599331
OODH01000260
484496
Bacteroidota
TTG
Gln
>WENV183600040
OODH01044038
117804
Bacteroidota
TAG
Leu
>WENV183599269
OODH01000093
398836
Bacteroidota
GCA
Cys
>WENV183599350
OODH01000307
398836
Bacteroidota
GCA
Cys
>WENV183599541
OODH01001499
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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