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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183607915
OODP01000147
295385
Bacteroidota
CCA
Trp
>WENV183608054
OODP01000496
295385
Bacteroidota
CCA
Trp
>WENV183608251
OODP01003039
285360
Bacteroidota
TTT
Lys
>WENV183608352
OODP01007501
285360
Bacteroidota
TTT
Lys
>WENV183607918
OODP01000149
117741
Bacteroidota
TAG
Leu
>WENV183607836
OODP01000034
398829
Bacteroidota
CCT
Arg
>WENV183608213
OODP01002169
398829
Bacteroidota
CCT
Arg
>WENV183608016
OODP01000337
404226
Bacteroidota
CCT
Arg
>WENV183608407
OODP01011942
175904
Bacteroidota
CGG
Pro
>WENV183607778
OODP01000001
289031
Bacteroidota
CAT
Met
>WENV183608058
OODP01000523
280557
Bacteroidota
CAT
Met
>WENV183608192
OODP01001629
280557
Bacteroidota
CAT
Met
>WENV183608258
OODP01003366
280557
Bacteroidota
CAT
Met
>WENV183608322
OODP01005907
280557
Bacteroidota
CAT
Met
>WENV183608070
OODP01000610
20492
Bacteroidota
GGA
Ser
>WENV183607830
OODP01000025
20206
Bacteroidota
GGA
Ser
>WENV183607855
OODP01000053
483416
Bacteroidota
CTG
Gln
>WENV183608015
OODP01000337
398871
Bacteroidota
TTC
Glu
>WENV183608164
OODP01001353
56493
Bacteroidota
TGA
Ser
>WENV183608193
OODP01001659
175906
Bacteroidota
GTG
His
>WENV183607852
OODP01000050
175903
Bacteroidota
GTG
His
>WENV183608381
OODP01009543
291612
Bacteroidota
>WENV183608064
OODP01000532
118089
Bacteroidota
TAG
Leu
>WENV183607937
OODP01000197
175908
Bacteroidota
GTC
Asp
>WENV183608239
OODP01002712
156406
Bacteroidota
TAC
Val
>WENV183608014
OODP01000330
178907
Bacteroidota
TCT
Arg
>WENV183607799
OODP01000008
405877
Bacteroidota
GGT
Thr
>WENV183608005
OODP01000284
182267
Bacteroidota
GTT
Asn
>WENV183608006
OODP01000284
182267
Bacteroidota
GTT
Asn
>WENV183608007
OODP01000284
182267
Bacteroidota
GTT
Asn
>WENV183608142
OODP01001140
182267
Bacteroidota
GTT
Asn
>WENV183608143
OODP01001140
182267
Bacteroidota
GTT
Asn
>WENV183608117
OODP01000993
20449
Bacteroidota
GGA
Ser
>WENV183608012
OODP01000299
21127
Bacteroidota
GGA
Ser
>WENV183607823
OODP01000016
56072
Bacteroidota
TAA
Leu
>WENV183607939
OODP01000199
56072
Bacteroidota
TAA
Leu
>WENV183608089
OODP01000753
56072
Bacteroidota
TAA
Leu
>WENV183607847
OODP01000045
57807
Bacteroidota
TGA
Ser
>WENV183607861
OODP01000068
57807
Bacteroidota
TGA
Ser
>WENV183607935
OODP01000194
57807
Bacteroidota
TGA
Ser
>WENV183608168
OODP01001415
57807
Bacteroidota
TGA
Ser
>WENV183608284
OODP01004146
57807
Bacteroidota
TGA
Ser
>WENV183608292
OODP01004491
57807
Bacteroidota
TGA
Ser
>WENV183608294
OODP01004505
57807
Bacteroidota
TGA
Ser
>WENV183607817
OODP01000014
175902
Bacteroidota
GGC
Ala
>WENV183608103
OODP01000882
480404
Bacteroidota
TTG
Gln
>WENV183607850
OODP01000047
280451
Bacteroidota
CGT
Thr
>WENV183607853
OODP01000051
99847
Bacteroidota
GTA
Tyr
>WENV183607916
OODP01000148
99847
Bacteroidota
GTA
Tyr
>WENV183608035
OODP01000433
99847
Bacteroidota
GTA
Tyr
>WENV183608052
OODP01000496
99847
Bacteroidota
GTA
Tyr
>WENV183607943
OODP01000200
399200
Bacteroidota
CAT
Met
>WENV183607783
OODP01000001
186874
Bacteroidota
CAT
Met
>WENV183608165
OODP01001359
399026
Bacteroidota
CCT
Arg
>WENV183607965
OODP01000255
280478
Bacteroidota
GCC
Gly
>WENV183608057
OODP01000511
175844
Bacteroidota
GGC
Ala
>WENV183608092
OODP01000762
175844
Bacteroidota
GGC
Ala
>WENV183608452
OODP01017470
280532
Bacteroidota
>WENV183608338
OODP01006223
73011
Bacteroidota
CAA
Leu
>WENV183608289
OODP01004399
186142
Bacteroidota
GAT
Ile
>WENV183607846
OODP01000043
398828
Bacteroidota
CCG
Arg
>WENV183608056
OODP01000509
74084
Bacteroidota
CAG
Leu
>WENV183608027
OODP01000385
480325
Bacteroidota
CTG
Gln
>WENV183608144
OODP01001151
176192
Bacteroidota
TCT
Arg
>WENV183607835
OODP01000030
280446
Bacteroidota
TTT
Lys
>WENV183607851
OODP01000049
280446
Bacteroidota
TTT
Lys
>WENV183607871
OODP01000086
280446
Bacteroidota
TTT
Lys
>WENV183608194
OODP01001679
484496
Bacteroidota
TTG
Gln
>WENV183608069
OODP01000582
285750
Bacteroidota
CCC
Gly
>WENV183608484
OODP01023173
188555
Bacteroidota
CAT
Met
>WENV183608290
OODP01004399
186143
Bacteroidota
TGC
Ala
>WENV183607801
OODP01000010
398836
Bacteroidota
GCA
Cys
>WENV183607970
OODP01000259
398836
Bacteroidota
GCA
Cys
>WENV183608017
OODP01000341
398836
Bacteroidota
GCA
Cys
>WENV183608210
OODP01002103
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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