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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
100 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183611225
OODT01000062
285360
Bacteroidota
TTT
Lys
>WENV183611521
OODT01000411
117741
Bacteroidota
TAG
Leu
>WENV183611254
OODT01000082
398829
Bacteroidota
CCT
Arg
>WENV183611363
OODT01000172
398829
Bacteroidota
CCT
Arg
>WENV183611430
OODT01000246
398829
Bacteroidota
CCT
Arg
>WENV183611358
OODT01000166
404226
Bacteroidota
CCT
Arg
>WENV183611476
OODT01000313
404226
Bacteroidota
CCT
Arg
>WENV183611496
OODT01000355
175904
Bacteroidota
CGG
Pro
>WENV183611169
OODT01000024
73057
Bacteroidota
GAG
Leu
>WENV183612031
OODT01003969
289031
Bacteroidota
CAT
Met
>WENV183611426
OODT01000239
280553
Bacteroidota
TTT
Lys
>WENV183612187
OODT01015467
280553
Bacteroidota
TTT
Lys
>WENV183611175
OODT01000028
280557
Bacteroidota
CAT
Met
>WENV183611397
OODT01000207
20206
Bacteroidota
GGA
Ser
>WENV183612088
OODT01005730
483416
Bacteroidota
CTG
Gln
>WENV183611356
OODT01000166
398871
Bacteroidota
TTC
Glu
>WENV183611357
OODT01000166
398871
Bacteroidota
TTC
Glu
>WENV183611274
OODT01000094
201819
Bacteroidota
CAT
Met
>WENV183611194
OODT01000037
56493
Bacteroidota
TGA
Ser
>WENV183611462
OODT01000292
175906
Bacteroidota
GTG
His
>WENV183611195
OODT01000037
175903
Bacteroidota
GTG
His
>WENV183611192
OODT01000036
351598
Bacteroidota
CGG
Pro
>WENV183611399
OODT01000208
351598
Bacteroidota
CGG
Pro
>WENV183611448
OODT01000261
351598
Bacteroidota
CGG
Pro
>WENV183611553
OODT01000492
351598
Bacteroidota
CGG
Pro
>WENV183611838
OODT01001518
351598
Bacteroidota
CGG
Pro
>WENV183611773
OODT01001122
118089
Bacteroidota
TAG
Leu
>WENV183612050
OODT01004627
398872
Bacteroidota
GGT
Thr
>WENV183611497
OODT01000355
280530
Bacteroidota
CCA
Trp
>WENV183611320
OODT01000121
175936
Bacteroidota
CAT
Met
>WENV183611457
OODT01000286
203954
Bacteroidota
GTC
Asp
>WENV183611581
OODT01000544
178907
Bacteroidota
TCT
Arg
>WENV183612119
OODT01008360
405877
Bacteroidota
GGT
Thr
>WENV183611239
OODT01000070
29791
Bacteroidota
GCT
Ser
>WENV183612129
OODT01009661
182267
Bacteroidota
GTT
Asn
>WENV183611526
OODT01000427
20449
Bacteroidota
GGA
Ser
>WENV183611819
OODT01001442
20449
Bacteroidota
GGA
Ser
>WENV183611577
OODT01000537
56072
Bacteroidota
TAA
Leu
>WENV183611477
OODT01000315
175902
Bacteroidota
GGC
Ala
>WENV183611240
OODT01000070
398860
Bacteroidota
CTC
Glu
>WENV183611258
OODT01000086
398860
Bacteroidota
CTC
Glu
>WENV183611649
OODT01000709
398860
Bacteroidota
CTC
Glu
>WENV183611292
OODT01000104
480404
Bacteroidota
TTG
Gln
>WENV183611486
OODT01000335
480404
Bacteroidota
TTG
Gln
>WENV183611147
OODT01000015
174201
Bacteroidota
GGG
Pro
>WENV183611165
OODT01000023
174201
Bacteroidota
GGG
Pro
>WENV183611412
OODT01000228
280451
Bacteroidota
CGT
Thr
>WENV183611118
OODT01000005
99847
Bacteroidota
GTA
Tyr
>WENV183611362
OODT01000170
99847
Bacteroidota
GTA
Tyr
>WENV183611455
OODT01000284
99847
Bacteroidota
GTA
Tyr
>WENV183611541
OODT01000478
399200
Bacteroidota
CAT
Met
>WENV183611547
OODT01000482
399200
Bacteroidota
CAT
Met
>WENV183612176
OODT01014664
186874
Bacteroidota
CAT
Met
>WENV183611396
OODT01000207
488746
Bacteroidota
CTG
Gln
>WENV183611442
OODT01000258
280478
Bacteroidota
GCC
Gly
>WENV183611444
OODT01000258
280478
Bacteroidota
GCC
Gly
>WENV183611716
OODT01000962
280478
Bacteroidota
GCC
Gly
>WENV183611111
OODT01000001
27524
Bacteroidota
GGA
Ser
>WENV183611115
OODT01000004
27524
Bacteroidota
GGA
Ser
>WENV183611222
OODT01000056
27524
Bacteroidota
GGA
Ser
>WENV183611341
OODT01000143
280532
Bacteroidota
>WENV183611212
OODT01000047
229246
Bacteroidota
GGC
Ala
>WENV183611369
OODT01000181
73011
Bacteroidota
CAA
Leu
>WENV183612083
OODT01005400
280515
Bacteroidota
CCA
Trp
>WENV183611125
OODT01000007
480318
Bacteroidota
CTG
Gln
>WENV183611163
OODT01000021
398828
Bacteroidota
CCG
Arg
>WENV183611499
OODT01000355
74084
Bacteroidota
CAG
Leu
>WENV183611108
OODT01000001
159415
Bacteroidota
TAC
Val
>WENV183611109
OODT01000001
159415
Bacteroidota
TAC
Val
>WENV183611392
OODT01000203
480325
Bacteroidota
CTG
Gln
>WENV183611393
OODT01000203
480325
Bacteroidota
CTG
Gln
>WENV183611272
OODT01000092
176192
Bacteroidota
TCT
Arg
>WENV183611342
OODT01000144
176192
Bacteroidota
TCT
Arg
>WENV183611387
OODT01000197
176192
Bacteroidota
TCT
Arg
>WENV183611402
OODT01000217
400088
Bacteroidota
GGT
Thr
>WENV183611224
OODT01000059
69204
Bacteroidota
TGA
Ser
>WENV183611333
OODT01000131
69204
Bacteroidota
TGA
Ser
>WENV183611350
OODT01000157
69204
Bacteroidota
TGA
Ser
>WENV183611472
OODT01000305
69204
Bacteroidota
TGA
Ser
>WENV183611148
OODT01000015
280446
Bacteroidota
TTT
Lys
>WENV183611364
OODT01000176
280446
Bacteroidota
TTT
Lys
>WENV183611359
OODT01000169
484496
Bacteroidota
TTG
Gln
>WENV183611524
OODT01000421
484496
Bacteroidota
TTG
Gln
>WENV183611196
OODT01000037
27502
Bacteroidota
GGA
Ser
>WENV183611554
OODT01000497
27502
Bacteroidota
GGA
Ser
>WENV183611646
OODT01000702
285750
Bacteroidota
CCC
Gly
>WENV183612086
OODT01005684
373714
Bacteroidota
GCC
Gly
>WENV183611128
OODT01000009
117804
Bacteroidota
TAG
Leu
>WENV183611124
OODT01000007
365112
Bacteroidota
TTT
Lys
>WENV183611238
OODT01000070
365112
Bacteroidota
TTT
Lys
>WENV183611257
OODT01000085
365112
Bacteroidota
TTT
Lys
>WENV183611279
OODT01000096
365112
Bacteroidota
TTT
Lys
>WENV183611280
OODT01000097
365112
Bacteroidota
TTT
Lys
>WENV183611763
OODT01001075
365112
Bacteroidota
TTT
Lys
>WENV183611229
OODT01000063
398836
Bacteroidota
GCA
Cys
>WENV183611276
OODT01000095
398836
Bacteroidota
GCA
Cys
>WENV183611348
OODT01000155
398836
Bacteroidota
GCA
Cys
>WENV183611439
OODT01000257
398836
Bacteroidota
GCA
Cys
>WENV183611516
OODT01000399
398836
Bacteroidota
GCA
Cys
>WENV183611354
OODT01000160
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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