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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183613360
OODU01003590
285360
Bacteroidota
TTT
Lys
>WENV183614117
OODU01026726
117741
Bacteroidota
TAG
Leu
>WENV183613328
OODU01003356
398829
Bacteroidota
CCT
Arg
>WENV183614088
OODU01025654
398829
Bacteroidota
CCT
Arg
>WENV183613689
OODU01008955
175838
Bacteroidota
GTT
Asn
>WENV183613690
OODU01008955
175838
Bacteroidota
GTT
Asn
>WENV183612407
OODU01000087
175904
Bacteroidota
CGG
Pro
>WENV183612393
OODU01000070
289031
Bacteroidota
CAT
Met
>WENV183614282
OODU01042801
280553
Bacteroidota
TTT
Lys
>WENV183612608
OODU01000350
280557
Bacteroidota
CAT
Met
>WENV183613821
OODU01012887
280557
Bacteroidota
CAT
Met
>WENV183613873
OODU01015368
280557
Bacteroidota
CAT
Met
>WENV183613955
OODU01019269
280557
Bacteroidota
CAT
Met
>WENV183614096
OODU01025948
280557
Bacteroidota
CAT
Met
>WENV183613654
OODU01008003
20492
Bacteroidota
GGA
Ser
>WENV183613731
OODU01009895
20206
Bacteroidota
GGA
Ser
>WENV183612301
OODU01000016
483416
Bacteroidota
CTG
Gln
>WENV183612597
OODU01000326
483416
Bacteroidota
CTG
Gln
>WENV183613536
OODU01005912
201819
Bacteroidota
CAT
Met
>WENV183612554
OODU01000278
56493
Bacteroidota
TGA
Ser
>WENV183613402
OODU01004126
56493
Bacteroidota
TGA
Ser
>WENV183613918
OODU01017072
175906
Bacteroidota
GTG
His
>WENV183613784
OODU01011675
175903
Bacteroidota
GTG
His
>WENV183612528
OODU01000258
118089
Bacteroidota
TAG
Leu
>WENV183612666
OODU01000452
398872
Bacteroidota
GGT
Thr
>WENV183612633
OODU01000391
203954
Bacteroidota
GTC
Asp
>WENV183613028
OODU01001525
203954
Bacteroidota
GTC
Asp
>WENV183614142
OODU01028694
203954
Bacteroidota
GTC
Asp
>WENV183614123
OODU01027555
178907
Bacteroidota
TCT
Arg
>WENV183612854
OODU01000835
405877
Bacteroidota
GGT
Thr
>WENV183612590
OODU01000317
182267
Bacteroidota
GTT
Asn
>WENV183612591
OODU01000317
182267
Bacteroidota
GTT
Asn
>WENV183612592
OODU01000317
182267
Bacteroidota
GTT
Asn
>WENV183613471
OODU01004742
182267
Bacteroidota
GTT
Asn
>WENV183613894
OODU01015934
182267
Bacteroidota
GTT
Asn
>WENV183614049
OODU01022886
182267
Bacteroidota
GTT
Asn
>WENV183612535
OODU01000266
20449
Bacteroidota
GGA
Ser
>WENV183612404
OODU01000085
21127
Bacteroidota
GGA
Ser
>WENV183612314
OODU01000021
56072
Bacteroidota
TAA
Leu
>WENV183612403
OODU01000084
56072
Bacteroidota
TAA
Leu
>WENV183613145
OODU01002058
56072
Bacteroidota
TAA
Leu
>WENV183613479
OODU01004907
57807
Bacteroidota
TGA
Ser
>WENV183613453
OODU01004518
175886
Bacteroidota
GGC
Ala
>WENV183612648
OODU01000425
175902
Bacteroidota
GGC
Ala
>WENV183613765
OODU01011134
175902
Bacteroidota
GGC
Ala
>WENV183613838
OODU01013649
175902
Bacteroidota
GGC
Ala
>WENV183614093
OODU01025792
179697
Bacteroidota
TGT
Thr
>WENV183613376
OODU01003714
398860
Bacteroidota
CTC
Glu
>WENV183613719
OODU01009654
398860
Bacteroidota
CTC
Glu
>WENV183614415
OODU01064435
398860
Bacteroidota
CTC
Glu
>WENV183613801
OODU01012358
480404
Bacteroidota
TTG
Gln
>WENV183612980
OODU01001360
280451
Bacteroidota
CGT
Thr
>WENV183613932
OODU01017548
280451
Bacteroidota
CGT
Thr
>WENV183612620
OODU01000371
99847
Bacteroidota
GTA
Tyr
>WENV183613036
OODU01001589
99847
Bacteroidota
GTA
Tyr
>WENV183613569
OODU01006452
99847
Bacteroidota
GTA
Tyr
>WENV183612779
OODU01000660
399200
Bacteroidota
CAT
Met
>WENV183613156
OODU01002090
399200
Bacteroidota
CAT
Met
>WENV183614373
OODU01056036
399200
Bacteroidota
CAT
Met
>WENV183612580
OODU01000311
186874
Bacteroidota
CAT
Met
>WENV183613485
OODU01005180
186874
Bacteroidota
CAT
Met
>WENV183612547
OODU01000273
332896
Bacteroidota
TTT
Lys
>WENV183612715
OODU01000527
332896
Bacteroidota
TTT
Lys
>WENV183612963
OODU01001272
332896
Bacteroidota
TTT
Lys
>WENV183613139
OODU01002027
332896
Bacteroidota
TTT
Lys
>WENV183613740
OODU01010269
332896
Bacteroidota
TTT
Lys
>WENV183612366
OODU01000052
488746
Bacteroidota
CTG
Gln
>WENV183613477
OODU01004814
488746
Bacteroidota
CTG
Gln
>WENV183613841
OODU01013763
280478
Bacteroidota
GCC
Gly
>WENV183612593
OODU01000319
280478
Bacteroidota
GCC
Gly
>WENV183612595
OODU01000319
280478
Bacteroidota
GCC
Gly
>WENV183613597
OODU01006943
20766
Bacteroidota
GGA
Ser
>WENV183613142
OODU01002043
175844
Bacteroidota
GGC
Ala
>WENV183614419
OODU01067531
73011
Bacteroidota
CAA
Leu
>WENV183613799
OODU01012102
280515
Bacteroidota
CCA
Trp
>WENV183612365
OODU01000052
158068
Bacteroidota
GGG
Pro
>WENV183612450
OODU01000132
158068
Bacteroidota
GGG
Pro
>WENV183612548
OODU01000273
158068
Bacteroidota
GGG
Pro
>WENV183612619
OODU01000370
158068
Bacteroidota
GGG
Pro
>WENV183613255
OODU01002710
158068
Bacteroidota
GGG
Pro
>WENV183613762
OODU01010954
158068
Bacteroidota
GGG
Pro
>WENV183612432
OODU01000117
398828
Bacteroidota
CCG
Arg
>WENV183614299
OODU01045768
398828
Bacteroidota
CCG
Arg
>WENV183613454
OODU01004527
74084
Bacteroidota
CAG
Leu
>WENV183614160
OODU01030078
159415
Bacteroidota
TAC
Val
>WENV183614375
OODU01056189
480325
Bacteroidota
CTG
Gln
>WENV183612299
OODU01000011
176192
Bacteroidota
TCT
Arg
>WENV183613048
OODU01001671
176192
Bacteroidota
TCT
Arg
>WENV183613825
OODU01013368
280446
Bacteroidota
TTT
Lys
>WENV183613849
OODU01014147
280446
Bacteroidota
TTT
Lys
>WENV183613854
OODU01014292
280446
Bacteroidota
TTT
Lys
>WENV183613246
OODU01002645
295349
Bacteroidota
CCA
Trp
>WENV183612859
OODU01000845
484496
Bacteroidota
TTG
Gln
>WENV183613065
OODU01001746
484496
Bacteroidota
TTG
Gln
>WENV183613080
OODU01001795
484496
Bacteroidota
TTG
Gln
>WENV183613433
OODU01004336
484496
Bacteroidota
TTG
Gln
>WENV183613513
OODU01005741
484496
Bacteroidota
TTG
Gln
>WENV183613353
OODU01003550
285750
Bacteroidota
CCC
Gly
>WENV183612344
OODU01000036
398836
Bacteroidota
GCA
Cys
>WENV183612501
OODU01000196
398836
Bacteroidota
GCA
Cys
>WENV183612636
OODU01000408
398836
Bacteroidota
GCA
Cys
>WENV183612810
OODU01000722
398836
Bacteroidota
GCA
Cys
>WENV183613020
OODU01001495
398836
Bacteroidota
GCA
Cys
>WENV183613021
OODU01001495
398836
Bacteroidota
GCA
Cys
>WENV183613114
OODU01001902
398836
Bacteroidota
GCA
Cys
>WENV183613549
OODU01006012
398836
Bacteroidota
GCA
Cys
>WENV183613786
OODU01011754
398836
Bacteroidota
GCA
Cys
>WENV183613895
OODU01015955
398836
Bacteroidota
GCA
Cys
>WENV183613941
OODU01017866
398836
Bacteroidota
GCA
Cys
>WENV183614113
OODU01026327
398836
Bacteroidota
GCA
Cys
>WENV183614114
OODU01026327
398836
Bacteroidota
GCA
Cys
>WENV183614491
OODU01094113
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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