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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183615561
OOEB01040966
281190
Bacteroidota
CAT
Met
>WENV183615675
OOEB01087493
223263
Bacteroidota
GTT
Asn
>WENV183615476
OOEB01023438
74253
Bacteroidota
GCT
Ser
>WENV183615789
OOEB01148867
399285
Bacteroidota
TTC
Glu
>WENV183615523
OOEB01032036
206043
Bacteroidota
GTC
Asp
>WENV183615788
OOEB01148834
413853
Bacteroidota
GGT
Thr
>WENV183615810
OOEB01160998
289409
Bacteroidota
TCC
Gly
>WENV183615621
OOEB01062883
361792
Bacteroidota
GAA
Phe
>WENV183615766
OOEB01138108
481829
Bacteroidota
GCA
Cys
>WENV183615489
OOEB01024907
437306
Bacteroidota
TTC
Glu
>WENV183615856
OOEB01192373
156255
Bacteroidota
TAC
Val
>WENV183615658
OOEB01078483
186597
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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