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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617656
OOEG01032322
170858
Bacteroidota
TGG
Pro
>WENV183617613
OOEG01017838
176863
Bacteroidota
CAT
Met
>WENV183617548
OOEG01007450
120026
Bacteroidota
GTA
Tyr
>WENV183617785
OOEG01100901
372872
Bacteroidota
TCC
Gly
>WENV183617722
OOEG01061639
365088
Bacteroidota
TCC
Gly
>WENV183617735
OOEG01069785
155786
Bacteroidota
TGG
Pro
>WENV183617736
OOEG01069785
176707
Bacteroidota
TCT
Arg
>WENV183617637
OOEG01027712
284239
Bacteroidota
TTT
Lys
>WENV183617808
OOEG01119154
235895
Bacteroidota
GTT
Asn
>WENV183617863
OOEG01169933
402343
Bacteroidota
CCA
Trp
>WENV183617721
OOEG01061639
118749
Bacteroidota
GTA
Tyr
>WENV183617706
OOEG01054351
197245
Bacteroidota
TCT
Arg
>WENV183617633
OOEG01025809
118418
Bacteroidota
TAG
Leu
>WENV183617847
OOEG01153525
361792
Bacteroidota
GAA
Phe
>WENV183617822
OOEG01134156
481829
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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