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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183620105
OOFR01006113
402390
Bacteroidota
TTC
Glu
>WENV183620407
OOFR01052261
120026
Bacteroidota
GTA
Tyr
>WENV183620022
OOFR01002371
156605
Bacteroidota
GAC
Val
>WENV183620116
OOFR01007237
281190
Bacteroidota
CAT
Met
>WENV183620286
OOFR01023079
176707
Bacteroidota
TCT
Arg
>WENV183620148
OOFR01009537
291910
Bacteroidota
TTG
Gln
>WENV183620262
OOFR01019542
399285
Bacteroidota
TTC
Glu
>WENV183620417
OOFR01054084
197245
Bacteroidota
TCT
Arg
>WENV183620438
OOFR01060003
197245
Bacteroidota
TCT
Arg
>WENV183620238
OOFR01017269
176817
Bacteroidota
CAT
Met
>WENV183620460
OOFR01065395
437306
Bacteroidota
TTC
Glu
>WENV183620437
OOFR01060003
156424
Bacteroidota
TGG
Pro
>WENV183620458
OOFR01064980
399343
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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