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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183620628
OOFS01006922
402532
Bacteroidota
GCC
Gly
>WENV183620673
OOFS01011239
120026
Bacteroidota
GTA
Tyr
>WENV183620540
OOFS01001422
402090
Bacteroidota
TTG
Gln
>WENV183620639
OOFS01007558
402090
Bacteroidota
TTG
Gln
>WENV183620674
OOFS01011239
364431
Bacteroidota
TCC
Gly
>WENV183620687
OOFS01014027
366169
Bacteroidota
GAA
Phe
>WENV183620753
OOFS01027968
344563
Bacteroidota
TTG
Gln
>WENV183620560
OOFS01001959
402343
Bacteroidota
CCA
Trp
>WENV183620818
OOFS01045308
206043
Bacteroidota
GTC
Asp
>WENV183620683
OOFS01012995
372845
Bacteroidota
CCA
Trp
>WENV183620605
OOFS01004794
379077
Bacteroidota
TTT
Lys
>WENV183620686
OOFS01013813
176817
Bacteroidota
CAT
Met
>WENV183620682
OOFS01012727
289409
Bacteroidota
TCC
Gly
>WENV183620576
OOFS01002747
481829
Bacteroidota
GCA
Cys
>WENV183620577
OOFS01002861
64185
Bacteroidota
TGA
Ser
>WENV183620593
OOFS01004137
156424
Bacteroidota
TGG
Pro
>WENV183620867
OOFS01067541
156424
Bacteroidota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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