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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1015759
SRR023846.184664
176607
Bacteroidota
CAT
Met
>SRA1015379
SRR023846.36560
284495
Bacteroidota
CCC
Gly
>SRA1016311
SRR023846.444410
399181
Bacteroidota
CCG
Arg
>SRA1015624
SRR023846.136954
281130
Bacteroidota
GAA
Phe
>SRA1016055
SRR023846.326670
281130
Bacteroidota
GAA
Phe
>SRA1015373
SRR023846.34156
155766
Bacteroidota
GAC
Val
>SRA1015608
SRR023846.131183
118439
Bacteroidota
GAG
Leu
>SRA1015361
SRR023846.30183
238850
Bacteroidota
GAT
Ile
>SRA1016359
SRR023846.464443
238850
Bacteroidota
GAT
Ile
>SRA1016280
SRR023846.433817
284496
Bacteroidota
GCC
Gly
>SRA1016547
SRR023846.558063
284496
Bacteroidota
GCC
Gly
>SRA1015387
SRR023846.39253
179685
Bacteroidota
GGG
Pro
>SRA1015927
SRR023846.266341
179685
Bacteroidota
GGG
Pro
>SRA1015776
SRR023846.194360
400970
Bacteroidota
GGT
Thr
>SRA1016451
SRR023846.503935
179687
Bacteroidota
GTG
His
>SRA1015527
SRR023846.98259
179691
Bacteroidota
GTT
Asn
>SRA1015760
SRR023846.185211
165648
Bacteroidota
TAC
Val
>SRA1016039
SRR023846.320070
165648
Bacteroidota
TAC
Val
>SRA1016254
SRR023846.420590
165648
Bacteroidota
TAC
Val
>SRA1015814
SRR023846.209564
399180
Bacteroidota
TTC
Glu
>SRA1015852
SRR023846.228181
399180
Bacteroidota
TTC
Glu
>SRA1016347
SRR023846.460949
284498
Bacteroidota
TTG
Gln
>SRA1016353
SRR023846.461497
284498
Bacteroidota
TTG
Gln
>SRA1016416
SRR023846.487627
284498
Bacteroidota
TTG
Gln
>SRA1016461
SRR023846.511042
303966
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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