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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1023473
SRR035084.106146
439628
Bacteroidota
CCT
Arg
>SRA1023851
SRR035084.190071
118418
Bacteroidota
TAG
Leu
>SRA1024018
SRR035084.231239
399343
Bacteroidota
TTC
Glu
>SRA1024101
SRR035084.251023
320084
Bacteroidota
TTT
Lys
>SRA1024243
SRR035084.280086
177083
Bacteroidota
TGT
Thr
>SRA1023196
SRR035084.33659
340026
Bacteroidota
CAT
Met
>SRA1024772
SRR035084.397798
439628
Bacteroidota
CCT
Arg
>SRA1024774
SRR035084.398468
282831
Bacteroidota
TTT
Lys
>SRA1024813
SRR035084.409749
179598
Bacteroidota
CAT
Met
>SRA1024912
SRR035084.434529
56162
Bacteroidota
TGA
Ser
>SRA1024965
SRR035084.448160
155808
Bacteroidota
TGG
Pro
>SRA1025297
SRR035084.544415
227539
Bacteroidota
GTT
Asn
>SRA1025316
SRR035084.549855
177651
Bacteroidota
GGC
Ala
>SRA1023276
SRR035084.60254
177083
Bacteroidota
TGT
Thr
>SRA1023358
SRR035084.77639
227539
Bacteroidota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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