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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180738416
ODHD01000021
240188
Betaproteobacteria
GAA
Phe
>WENV180738422
ODHD01000023
235250
Betaproteobacteria
>WENV180738423
ODHD01000023
235250
Betaproteobacteria
>WENV180738591
ODHD01000131
62536
Betaproteobacteria
CAG
Leu
>WENV180738637
ODHD01000190
240188
Betaproteobacteria
GAA
Phe
>WENV180738657
ODHD01000226
16424
Betaproteobacteria
GGA
Ser
>WENV180738685
ODHD01000274
155338
Betaproteobacteria
>WENV180738684
ODHD01000274
155338
Betaproteobacteria
>WENV180738780
ODHD01000516
240188
Betaproteobacteria
GAA
Phe
>WENV180738841
ODHD01000773
97609
Betaproteobacteria
CAA
Leu
>WENV180738945
ODHD01001411
358597
Betaproteobacteria
CCT
Arg
>WENV180739091
ODHD01005033
352197
Betaproteobacteria
GGT
Thr
>WENV180739292
ODHD01026199
238786
Betaproteobacteria
>WENV180739343
ODHD01039784
16424
Betaproteobacteria
GGA
Ser
>WENV180739358
ODHD01047396
58732
Betaproteobacteria
CAG
Leu
>WENV180739458
ODHD01106212
144721
Betaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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