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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180789033
ODIS01205027
180972
Betaproteobacteria
GAC
Val
>WENV180788482
ODIS01066506
118105
Betaproteobacteria
CAA
Leu
>WENV180788272
ODIS01043187
178781
Betaproteobacteria
TCT
Arg
>WENV180787470
ODIS01006800
347462
Betaproteobacteria
CGT
Thr
>WENV180787538
ODIS01008012
187637
Betaproteobacteria
>WENV180787776
ODIS01014889
400529
Betaproteobacteria
CCT
Arg
>WENV180788965
ODIS01166997
184717
Betaproteobacteria
ACG
Arg
>WENV180787993
ODIS01025008
20442
Betaproteobacteria
GGA
Ser
>WENV180787612
ODIS01009875
188039
Betaproteobacteria
TCT
Arg
>WENV180789371
ODIS01468539
280601
Betaproteobacteria
TTG
Gln
>WENV180789317
ODIS01442816
77402
Betaproteobacteria
CAG
Leu
>WENV180787536
ODIS01008012
240095
Betaproteobacteria
TTG
Gln
>WENV180787537
ODIS01008012
240095
Betaproteobacteria
TTG
Gln
>WENV180786841
ODIS01000334
452715
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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