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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181091501
OEBC01041567
256200
Betaproteobacteria
CGT
Thr
>WENV181090736
OEBC01002962
97609
Betaproteobacteria
CAA
Leu
>WENV181091421
OEBC01032128
17412
Betaproteobacteria
GGA
Ser
>WENV181091169
OEBC01015937
159509
Betaproteobacteria
CAT
Met
>WENV181092150
OEBC01278667
243641
Betaproteobacteria
TAC
Val
>WENV181092260
OEBC01386533
58732
Betaproteobacteria
CAG
Leu
>WENV181091090
OEBC01012473
62536
Betaproteobacteria
CAG
Leu
>WENV181092299
OEBC01404750
235250
Betaproteobacteria
>WENV181091961
OEBC01155020
235250
Betaproteobacteria
>WENV181091111
OEBC01013241
95890
Betaproteobacteria
CAA
Leu
>WENV181091294
OEBC01022943
240188
Betaproteobacteria
GAA
Phe
>WENV181090843
OEBC01004686
240188
Betaproteobacteria
GAA
Phe
>WENV181090763
OEBC01003367
240188
Betaproteobacteria
GAA
Phe
>WENV181090512
OEBC01000867
155338
Betaproteobacteria
>WENV181090511
OEBC01000867
155338
Betaproteobacteria
>WENV181090945
OEBC01007020
352197
Betaproteobacteria
GGT
Thr
>WENV181091075
OEBC01011269
16424
Betaproteobacteria
GGA
Ser
>WENV181090976
OEBC01007594
358597
Betaproteobacteria
CCT
Arg
>WENV181091114
OEBC01013332
246021
Betaproteobacteria
GTT
Asn
>WENV181092159
OEBC01288763
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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