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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743687
PJUJ01022154
145694
Betaproteobacteria
ACG
Arg
>WENV183743736
PJUJ01033811
339485
Betaproteobacteria
CAC
Val
>WENV183743506
PJUJ01003033
153173
Betaproteobacteria
CAT
Met
>WENV183743607
PJUJ01009848
415147
Betaproteobacteria
CCC
Gly
>WENV183743513
PJUJ01003223
339519
Betaproteobacteria
CCT
Arg
>WENV183743631
PJUJ01012777
238346
Betaproteobacteria
CGT
Thr
>WENV183743721
PJUJ01030277
238349
Betaproteobacteria
CTT
Lys
>WENV183743660
PJUJ01015725
412422
Betaproteobacteria
GCA
Cys
>WENV183743584
PJUJ01007908
248752
Betaproteobacteria
GCC
Gly
>WENV183743613
PJUJ01010595
17930
Betaproteobacteria
GGA
Ser
>WENV183743410
PJUJ01000941
256728
Betaproteobacteria
GTT
Asn
>WENV183743412
PJUJ01000941
256728
Betaproteobacteria
GTT
Asn
>WENV183743670
PJUJ01018425
293915
Betaproteobacteria
GTT
Asn
>WENV183743411
PJUJ01000941
293915
Betaproteobacteria
GTT
Asn
>WENV183743409
PJUJ01000941
293915
Betaproteobacteria
GTT
Asn
>WENV183743421
PJUJ01001076
149229
Betaproteobacteria
TCT
Arg
>WENV183743536
PJUJ01004580
175782
Betaproteobacteria
TCT
Arg
>WENV183743530
PJUJ01003765
151824
Betaproteobacteria
TCT
Arg
>WENV183743654
PJUJ01014912
292518
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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